We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0051.381 gene 0 gene
2 genes 1 species 0 species
UBERON:000220610210
chordate pharynx 0.0055.251 gene 1 gene 1 gene 1 species 1 species UBERON:000104211111
optic fissure 1.0096.051 gene 0 gene
2 genes 1 species 0 species
UBERON:000541210210
postcranial axial skeleton -1.0051.210 gene
1 gene 2 genes 0 species
1 species UBERON:000209001201
epithelial cell of pancreas -1.0050.540 gene
1 gene 2 genes 0 species
1 species CL:000008301201
semi-lunar valve -1.0037.770 gene
1 gene 2 genes 0 species
1 species UBERON:000562301201
inferior olivary complex -1.0046.120 gene
1 gene 2 genes 0 species
1 species UBERON:000212701201
brain blood vessel 1.0058.131 gene 0 gene
2 genes 1 species 0 species
UBERON:000349910210
hindlimb, pelvic fin 1.0064.982 genes 0 gene
1 gene 2 species 0 species
UBERON:0002103, UBERON:000015220120
hypothalamus 1.0072.952 genes 0 gene
1 gene 2 species 0 species
UBERON:000189820120
nervous system 1.0061.093 genes 0 gene
0 gene
3 species 0 species
UBERON:000101630030
gingival epithelium -1.0042.370 gene
1 gene 2 genes 0 species
1 species UBERON:000194901201
gastrula 0.0043.171 gene 1 gene 1 gene 1 species 1 species UBERON:000473411111
septum transversum 1.0056.241 gene 0 gene
2 genes 1 species 0 species
UBERON:000416110210
otic placode -1.0047.580 gene
1 gene 2 genes 0 species
1 species UBERON:000306901201
cleaving embryo 1.0056.541 gene 0 gene
2 genes 1 species 0 species
UBERON:000701010210
midbrain 1.0088.262 genes 0 gene
1 gene 2 species 0 species
UBERON:000189120120
retinal neural layer 1.0088.201 gene 0 gene
2 genes 1 species 0 species
UBERON:000390210210
cornea 1.0053.361 gene 0 gene
2 genes 1 species 0 species
UBERON:000096410210
hindbrain 1.0081.642 genes 0 gene
1 gene 2 species 0 species
UBERON:000202820120
cranial nerve II 1.0080.242 genes 0 gene
1 gene 2 species 0 species
UBERON:000094120120
stomach 1.0034.592 genes 0 gene
1 gene 2 species 0 species
UBERON:000094520120
inner nuclear layer of retina 1.0055.871 gene 0 gene
2 genes 1 species 0 species
UBERON:000179110210
pituitary gland 1.0054.742 genes 0 gene
1 gene 2 species 0 species
UBERON:000000720120
inferior vagus X ganglion -1.0043.090 gene
1 gene 2 genes 0 species
1 species UBERON:000536301201
female reproductive system 1.0041.513 genes 0 gene
0 gene
3 species 0 species
UBERON:000047430030
epithelium of esophagus -1.0050.040 gene
1 gene 2 genes 0 species
1 species UBERON:000197601201
apical ectodermal ridge -1.0053.830 gene
1 gene 2 genes 0 species
1 species UBERON:000435601201
kidney epithelium 0.0048.461 gene 1 gene 1 gene 1 species 1 species UBERON:000481911111
pancreas 1.0041.092 genes 0 gene
1 gene 2 species 0 species
UBERON:000126420120
upper leg skin -1.0051.760 gene
1 gene 2 genes 0 species
1 species UBERON:000426201201
extra-ocular muscle 1.0048.801 gene 0 gene
2 genes 1 species 0 species
UBERON:000160110210
midbrain-hindbrain boundary 1.0057.121 gene 0 gene
2 genes 1 species 0 species
UBERON:000305210210
optic stalk 1.0060.701 gene 0 gene
2 genes 1 species 0 species
UBERON:000309810210
limb, paired fin 1.0080.512 genes 0 gene
1 gene 2 species 0 species
UBERON:0002101, UBERON:000253420120
manus, pectoral fin radial bone 1.0091.141 gene 0 gene
2 genes 1 species 0 species
UBERON:0002398, UBERON:200158610210
olfactory pit 1.0065.381 gene 0 gene
2 genes 1 species 0 species
UBERON:000587010210
face 1.0057.133 genes 0 gene
0 gene
3 species 0 species
UBERON:000145630030
blood vessel 1.0054.142 genes 0 gene
1 gene 2 species 0 species
UBERON:000198120120
putamen 1.0095.041 gene 0 gene
2 genes 1 species 0 species
UBERON:000187410210
telencephalon 1.0091.182 genes 0 gene
1 gene 2 species 0 species
UBERON:000189320120
utricle of membranous labyrinth -1.0038.440 gene
1 gene 2 genes 0 species
1 species UBERON:000185301201
eyeball of camera-type eye 1.0079.532 genes 0 gene
1 gene 2 species 0 species
UBERON:001023020120
right ovary -1.0039.790 gene
1 gene 2 genes 0 species
1 species UBERON:000211801201
male reproductive system 1.0043.203 genes 0 gene
0 gene
3 species 0 species
UBERON:000007930030
testis 1.0091.583 genes 0 gene
0 gene
3 species 0 species
UBERON:000047330030
multi-cellular organism 1.0073.313 genes 0 gene
0 gene
3 species 0 species
UBERON:000046830030
ventricular zone 1.0099.732 genes 0 gene
1 gene 2 species 0 species
UBERON:000305320120
skin epidermis 1.0081.212 genes 0 gene
1 gene 2 species 0 species
UBERON:000100320120
embryonic post-anal tail 1.0060.241 gene 0 gene
2 genes 1 species 0 species
UBERON:000714410210
intraembryonic coelom 1.0066.661 gene 0 gene
2 genes 1 species 0 species
UBERON:000388710210
peripheral nervous system 1.0067.293 genes 0 gene
0 gene
3 species 0 species
UBERON:000001030030
central nervous system 1.0088.602 genes 0 gene
1 gene 2 species 0 species
UBERON:000101720120
fibroblast 1.0054.581 gene 0 gene
2 genes 1 species 0 species
CL:000005710210
iris 1.0085.961 gene 0 gene
2 genes 1 species 0 species
UBERON:000176910210
head 1.0092.683 genes 0 gene
0 gene
3 species 0 species
UBERON:000003330030
choroid plexus epithelium 1.0049.752 genes 0 gene
1 gene 2 species 0 species
UBERON:000391120120
trigeminal ganglion 0.0060.251 gene 1 gene 1 gene 1 species 1 species UBERON:000167511111
forebrain 1.0085.832 genes 0 gene
1 gene 2 species 0 species
UBERON:000189020120
caecum 1.0041.141 gene 0 gene
2 genes 1 species 0 species
UBERON:000115310210
olfactory bulb 0.0083.801 gene 1 gene 1 gene 1 species 1 species UBERON:000226411111
diencephalon 1.0080.242 genes 0 gene
1 gene 2 species 0 species
UBERON:000189420120
heart left ventricle, primary heart field 0.0053.451 gene 1 gene 1 gene 1 species 1 species UBERON:0002084, UBERON:000414011111
lens of camera-type eye 1.0085.331 gene 0 gene
2 genes 1 species 0 species
UBERON:000096510210
ear 1.0066.291 gene 0 gene
2 genes 1 species 0 species
UBERON:000169010210
brain 0.3393.782 genes 1 gene 0 gene
2 species 1 species UBERON:000095521021
collection of basal ganglia 1.0077.772 genes 0 gene
1 gene 2 species 0 species
UBERON:001001120120
male germ cell 1.0049.302 genes 0 gene
1 gene 2 species 0 species
CL:000001520120
smooth muscle tissue -1.0024.250 gene
1 gene 2 genes 0 species
1 species UBERON:000113501201
upper arm skin 1.0064.271 gene 0 gene
2 genes 1 species 0 species
UBERON:000426310210
heart right ventricle -1.0041.760 gene
2 genes 1 gene 0 species
2 species UBERON:000208002102
lip 1.0093.031 gene 0 gene
2 genes 1 species 0 species
UBERON:000183310210
gonad 1.0057.673 genes 0 gene
0 gene
3 species 0 species
UBERON:000099130030
skin of hip 1.0064.391 gene 0 gene
2 genes 1 species 0 species
UBERON:000155410210
female gonad 1.0064.943 genes 0 gene
0 gene
3 species 0 species
UBERON:000099230030
internal ear 1.0085.491 gene 0 gene
2 genes 1 species 0 species
UBERON:000184610210
ileum -1.0034.660 gene
1 gene 2 genes 0 species
1 species UBERON:000211601201
olfactory lobe 1.0069.992 genes 0 gene
1 gene 2 species 0 species
UBERON:000536620120
cartilage tissue 1.0055.751 gene 0 gene
2 genes 1 species 0 species
UBERON:000241810210
blastopore, primitive streak -1.0040.630 gene
1 gene 2 genes 0 species
1 species UBERON:0000100, UBERON:000434101201
thyroid gland 0.0073.801 gene 1 gene 1 gene 1 species 1 species UBERON:000204611111
optic cup 1.0069.221 gene 0 gene
2 genes 1 species 0 species
UBERON:000307210210
adenohypophysis 1.0066.191 gene 0 gene
2 genes 1 species 0 species
UBERON:000219610210
midbrain tegmentum 1.0073.902 genes 0 gene
1 gene 2 species 0 species
UBERON:000194320120
larva 1.0029.911 gene 0 gene
2 genes 1 species 0 species
UBERON:000254810210
bone element 1.0041.612 genes 0 gene
1 gene 2 species 0 species
UBERON:000147420120
fundus of stomach -1.0034.190 gene
1 gene 2 genes 0 species
1 species UBERON:000116001201
cerebellum 1.0051.402 genes 0 gene
1 gene 2 species 0 species
UBERON:000203720120
pineal body 1.0048.391 gene 0 gene
2 genes 1 species 0 species
UBERON:000190510210
presumptive midbrain 1.0061.401 gene 0 gene
2 genes 1 species 0 species
UBERON:000961610210
dermis -1.0038.570 gene
1 gene 2 genes 0 species
1 species UBERON:000206701201
cardiac ventricle 0.0042.891 gene 1 gene 1 gene 1 species 1 species UBERON:000208211111
outflow tract -1.0042.100 gene
1 gene 2 genes 0 species
1 species UBERON:000414501201
saccule of membranous labyrinth -1.0047.220 gene
1 gene 2 genes 0 species
1 species UBERON:000185401201
caudal tuberculum, substantia nigra 0.0060.491 gene 1 gene 1 gene 1 species 1 species UBERON:2000633, UBERON:000203811111
camera-type eye 1.0086.682 genes 0 gene
1 gene 2 species 0 species
UBERON:000001920120
choroid plexus 1.0058.102 genes 0 gene
1 gene 2 species 0 species
UBERON:000188620120
ventricular system choroidal fissure -1.0049.970 gene
1 gene 2 genes 0 species
1 species UBERON:000219201201
thymus 0.0051.001 gene 1 gene 1 gene 1 species 1 species UBERON:000237011111
forelimb, pectoral fin 1.0079.162 genes 0 gene
1 gene 2 species 0 species
UBERON:0002102, UBERON:000015120120
tendon 1.0048.221 gene 0 gene
2 genes 1 species 0 species
UBERON:000004310210
motor neuron -1.0042.030 gene
1 gene 2 genes 0 species
1 species CL:000010001201
olfactory cortex 1.0068.742 genes 0 gene
1 gene 2 species 0 species
UBERON:000289420120
epithelium of lens 1.0051.471 gene 0 gene
2 genes 1 species 0 species
UBERON:000180310210
internal carotid artery -1.0040.890 gene
1 gene 2 genes 0 species
1 species UBERON:000153201201
1st arch mandibular component 1.0064.681 gene 0 gene
2 genes 1 species 0 species
UBERON:000723710210
calcareous tooth -1.0060.510 gene
1 gene 2 genes 0 species
1 species UBERON:000109101201
Ammon's horn 1.0095.732 genes 0 gene
1 gene 2 species 0 species
UBERON:000195420120
epiblast (generic) 1.0056.761 gene 0 gene
2 genes 1 species 0 species
UBERON:000253210210
adrenal cortex -1.0041.810 gene
1 gene 2 genes 0 species
1 species UBERON:000123501201
sternocleidomastoid -1.0035.800 gene
1 gene 2 genes 0 species
1 species UBERON:000112801201
brainstem 1.0061.122 genes 0 gene
1 gene 2 species 0 species
UBERON:000229820120
aorta 0.0041.771 gene 1 gene 1 gene 1 species 1 species UBERON:000094711111
outer nuclear layer of retina 1.0066.651 gene 0 gene
2 genes 1 species 0 species
UBERON:000178910210
right kidney 1.0048.631 gene 0 gene
2 genes 1 species 0 species
UBERON:000453910210
retina 0.3383.402 genes 1 gene 0 gene
2 species 1 species UBERON:000096621021
somite -1.0041.230 gene
1 gene 2 genes 0 species
1 species UBERON:000232901201
intestine 0.3349.722 genes 1 gene 0 gene
2 species 1 species UBERON:000016021021
esophagus 1.0029.462 genes 0 gene
1 gene 2 species 0 species
UBERON:000104320120
myocardium -1.0043.250 gene
1 gene 2 genes 0 species
1 species UBERON:000234901201
blastula 1.0043.052 genes 0 gene
1 gene 2 species 0 species
UBERON:000030720120
right testis 1.0066.631 gene 0 gene
2 genes 1 species 0 species
UBERON:000453410210
blood 0.0045.281 gene 1 gene 1 gene 1 species 1 species UBERON:000017811111
adipose tissue 1.0042.322 genes 0 gene
1 gene 2 species 0 species
UBERON:000101320120
kidney blood vessel -1.0063.320 gene
1 gene 2 genes 0 species
1 species UBERON:000351701201
skeletal muscle tissue 0.0048.241 gene 1 gene 1 gene 1 species 1 species UBERON:000113411111
integumental system 1.0062.043 genes 0 gene
0 gene
3 species 0 species
UBERON:000241630030
cardiovascular system 1.0055.142 genes 0 gene
1 gene 2 species 0 species
UBERON:000453520120
spleen 0.3346.902 genes 1 gene 0 gene
2 species 1 species UBERON:000210621021
kidney 0.3340.542 genes 1 gene 0 gene
2 species 1 species UBERON:000211321021
intestinal epithelium -1.0041.670 gene
1 gene 2 genes 0 species
1 species UBERON:000127701201
pericardium -1.0041.830 gene
1 gene 2 genes 0 species
1 species UBERON:000240701201
lung, swim bladder 1.0051.423 genes 0 gene
0 gene
3 species 0 species
UBERON:0002048, UBERON:000686030030
cardiac atrium 0.0041.811 gene 1 gene 1 gene 1 species 1 species UBERON:000208111111
ventral horn of spinal cord -1.0038.710 gene
1 gene 2 genes 0 species
1 species UBERON:000225701201
islet of Langerhans 0.0041.341 gene 1 gene 1 gene 1 species 1 species UBERON:000000611111
metencephalon 1.0053.972 genes 0 gene
1 gene 2 species 0 species
UBERON:000189520120
neural tube 1.0069.042 genes 0 gene
1 gene 2 species 0 species
UBERON:000104920120
pleura 1.0062.651 gene 0 gene
2 genes 1 species 0 species
UBERON:000097710210
endocardial cushion 1.0047.021 gene 0 gene
2 genes 1 species 0 species
UBERON:000206210210
cerebral hemisphere 1.0075.712 genes 0 gene
1 gene 2 species 0 species
UBERON:000186920120
appendicular skeleton -1.0059.080 gene
1 gene 2 genes 0 species
1 species UBERON:000209101201
pigmented layer of retina 1.0098.432 genes 0 gene
1 gene 2 species 0 species
UBERON:000178220120
1st arch maxillary component 1.0064.691 gene 0 gene
2 genes 1 species 0 species
UBERON:000723810210
cerebellar cortex 1.0067.812 genes 0 gene
1 gene 2 species 0 species
UBERON:000212920120
cranial ganglion 1.0065.371 gene 0 gene
2 genes 1 species 0 species
UBERON:000171410210
heart 0.3342.062 genes 1 gene 0 gene
2 species 1 species UBERON:000094821021
liver 0.3368.752 genes 1 gene 0 gene
2 species 1 species UBERON:000210721021
cranium 1.0052.341 gene 0 gene
2 genes 1 species 0 species
UBERON:000312810210
colon 0.0043.521 gene 1 gene 1 gene 1 species 1 species UBERON:000115511111
left testis 1.0066.631 gene 0 gene
2 genes 1 species 0 species
UBERON:000453310210
muscle organ 0.3348.402 genes 1 gene 0 gene
2 species 1 species UBERON:000163021021
striatum 1.0076.412 genes 0 gene
1 gene 2 species 0 species
UBERON:000243520120
myocardium of ventricle -1.0039.700 gene
1 gene 2 genes 0 species
1 species UBERON:000108301201
optic vesicle 1.0061.531 gene 0 gene
2 genes 1 species 0 species
UBERON:000412810210
presomitic mesoderm -1.0044.380 gene
1 gene 2 genes 0 species
1 species UBERON:000305901201
olfactory epithelium 1.0098.092 genes 0 gene
1 gene 2 species 0 species
UBERON:000199720120
olfactory placode 1.0053.051 gene 0 gene
2 genes 1 species 0 species
UBERON:000305010210
meninx 1.0057.881 gene 0 gene
2 genes 1 species 0 species
UBERON:000236010210
dorsal root ganglion -1.0042.950 gene
2 genes 1 gene 0 species
2 species UBERON:000004402102
aortic valve -1.0042.310 gene
1 gene 2 genes 0 species
1 species UBERON:000213701201
ciliary body 1.0082.301 gene 0 gene
2 genes 1 species 0 species
UBERON:000177510210
ear vesicle 1.0044.221 gene 0 gene
2 genes 1 species 0 species
UBERON:000305110210
musculature 1.0057.682 genes 0 gene
1 gene 2 species 0 species
UBERON:000101520120
gall bladder 1.0037.481 gene 0 gene
2 genes 1 species 0 species
UBERON:000211010210
atrioventricular valve -1.0039.640 gene
1 gene 2 genes 0 species
1 species UBERON:000213301201
parathyroid gland, pharyngeal gill -1.0014.850 gene
1 gene 2 genes 0 species
1 species UBERON:0001132, UBERON:000020601201
renal system 1.0075.323 genes 0 gene
0 gene
3 species 0 species
UBERON:000100830030
gingiva -1.0039.270 gene
1 gene 2 genes 0 species
1 species UBERON:000182801201
peritoneum 1.0041.411 gene 0 gene
2 genes 1 species 0 species
UBERON:000235810210
zygote 1.0087.881 gene 0 gene
2 genes 1 species 0 species
CL:000036510210
nerve 1.0049.991 gene 0 gene
2 genes 1 species 0 species
UBERON:000102110210
respiratory system 1.0055.533 genes 0 gene
0 gene
3 species 0 species
UBERON:000100430030
medulla oblongata 1.0084.842 genes 0 gene
1 gene 2 species 0 species
UBERON:000189620120
pylorus -1.0041.490 gene
1 gene 2 genes 0 species
1 species UBERON:000116601201
caudate nucleus 1.0094.451 gene 0 gene
2 genes 1 species 0 species
UBERON:000187310210
embryo 1.0071.623 genes 0 gene
0 gene
3 species 0 species
UBERON:000092230030
left ovary 1.0044.871 gene 0 gene
2 genes 1 species 0 species
UBERON:000211910210

Do not show this banner again