We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 2 genes 0 species
1 species UBERON:000220601201
forelimb mesenchyme, mesenchyme pectoral fin 1.0056.241 gene 0 gene
2 genes 1 species 0 species
UBERON:0003859, UBERON:000393410210
postcranial axial skeleton 1.0057.461 gene 0 gene
2 genes 1 species 0 species
UBERON:000209010210
semi-lunar valve -1.0037.770 gene
1 gene 2 genes 0 species
1 species UBERON:000562301201
jaw muscle 1.0087.502 genes 0 gene
1 gene 2 species 0 species
UBERON:001164820120
brain blood vessel -1.0039.180 gene
1 gene 2 genes 0 species
1 species UBERON:000349901201
hindlimb, pelvic fin 1.0073.322 genes 0 gene
1 gene 2 species 0 species
UBERON:0002103, UBERON:000015220120
myotome 1.0094.742 genes 0 gene
1 gene 2 species 0 species
UBERON:000308220120
paraxial mesoderm 1.0078.842 genes 0 gene
1 gene 2 species 0 species
UBERON:000307720120
gastrula 1.0050.432 genes 0 gene
1 gene 2 species 0 species
UBERON:000473420120
midbrain 0.0073.651 gene 1 gene 1 gene 1 species 1 species UBERON:000189111111
retinal neural layer -1.0013.600 gene
1 gene 2 genes 0 species
1 species UBERON:000390201201
female reproductive system 1.0074.111 gene 0 gene
2 genes 1 species 0 species
UBERON:000047410210
myoblast 1.0062.501 gene 0 gene
2 genes 1 species 0 species
CL:000005610210
epithelium of esophagus -1.0068.320 gene
1 gene 2 genes 0 species
1 species UBERON:000197601201
kidney epithelium -1.0072.380 gene
1 gene 2 genes 0 species
1 species UBERON:000481901201
pancreas -1.0050.700 gene
2 genes 1 gene 0 species
2 species UBERON:000126402102
extra-ocular muscle 1.0090.002 genes 0 gene
1 gene 2 species 0 species
UBERON:000160120120
upper leg skin -1.0038.710 gene
1 gene 2 genes 0 species
1 species UBERON:000426201201
manus, pectoral fin radial bone -1.0045.890 gene
1 gene 2 genes 0 species
1 species UBERON:0002398, UBERON:200158601201
face 1.0082.142 genes 0 gene
1 gene 2 species 0 species
UBERON:000145620120
telencephalon 1.0074.422 genes 0 gene
1 gene 2 species 0 species
UBERON:000189320120
utricle of membranous labyrinth -1.0038.440 gene
1 gene 2 genes 0 species
1 species UBERON:000185301201
multi-cellular organism 1.0049.443 genes 0 gene
0 gene
3 species 0 species
UBERON:000046830030
ventricular zone -1.0027.720 gene
2 genes 1 gene 0 species
2 species UBERON:000305302102
hyoid muscle 1.0090.002 genes 0 gene
1 gene 2 species 0 species
UBERON:000549320120
skin epidermis 1.0041.981 gene 0 gene
2 genes 1 species 0 species
UBERON:000100310210
central nervous system 1.0051.053 genes 0 gene
0 gene
3 species 0 species
UBERON:000101730030
iris -1.0038.860 gene
1 gene 2 genes 0 species
1 species UBERON:000176901201
choroid plexus epithelium -1.0039.040 gene
1 gene 2 genes 0 species
1 species UBERON:000391101201
tongue muscle 1.0095.651 gene 0 gene
2 genes 1 species 0 species
UBERON:000037810210
trigeminal ganglion 0.0072.641 gene 1 gene 1 gene 1 species 1 species UBERON:000167511111
forebrain 1.0042.622 genes 0 gene
1 gene 2 species 0 species
UBERON:000189020120
caecum -1.0074.310 gene
1 gene 2 genes 0 species
1 species UBERON:000115301201
esophagus muscle -1.0050.000 gene
1 gene 2 genes 0 species
1 species UBERON:000383201201
ear 1.0045.392 genes 0 gene
1 gene 2 species 0 species
UBERON:000169020120
brain 1.0054.703 genes 0 gene
0 gene
3 species 0 species
UBERON:000095530030
smooth muscle tissue -1.0027.210 gene
1 gene 2 genes 0 species
1 species UBERON:000113501201
upper arm skin -1.0075.190 gene
1 gene 2 genes 0 species
1 species UBERON:000426301201
heart right ventricle -1.0067.050 gene
2 genes 1 gene 0 species
2 species UBERON:000208002102
lip 1.0066.411 gene 0 gene
2 genes 1 species 0 species
UBERON:000183310210
medial rectus extraocular muscle 1.0090.001 gene 0 gene
2 genes 1 species 0 species
UBERON:000160210210
internal ear 1.0084.491 gene 0 gene
2 genes 1 species 0 species
UBERON:000184610210
mouth 1.0064.283 genes 0 gene
0 gene
3 species 0 species
UBERON:000016530030
adenohypophysis -1.0017.470 gene
1 gene 2 genes 0 species
1 species UBERON:000219601201
larva 1.0061.301 gene 0 gene
2 genes 1 species 0 species
UBERON:000254810210
dermis 1.0059.931 gene 0 gene
2 genes 1 species 0 species
UBERON:000206710210
outflow tract -1.0046.990 gene
1 gene 2 genes 0 species
1 species UBERON:000414501201
saccule of membranous labyrinth -1.0047.220 gene
1 gene 2 genes 0 species
1 species UBERON:000185401201
choroid plexus 1.0058.101 gene 0 gene
2 genes 1 species 0 species
UBERON:000188610210
forelimb, pectoral fin 1.0081.943 genes 0 gene
0 gene
3 species 0 species
UBERON:0002102, UBERON:000015130030
tendon 1.0052.191 gene 0 gene
2 genes 1 species 0 species
UBERON:000004310210
internal carotid artery 1.0076.861 gene 0 gene
2 genes 1 species 0 species
UBERON:000153210210
calcareous tooth 1.0071.041 gene 0 gene
2 genes 1 species 0 species
UBERON:000109110210
epiblast (generic) 1.0049.271 gene 0 gene
2 genes 1 species 0 species
UBERON:000253210210
sternocleidomastoid 1.0085.801 gene 0 gene
2 genes 1 species 0 species
UBERON:000112810210
brainstem 1.0038.791 gene 0 gene
2 genes 1 species 0 species
UBERON:000229810210
retina 1.0048.072 genes 0 gene
1 gene 2 species 0 species
UBERON:000096620120
presumptive paraxial mesoderm 1.0054.991 gene 0 gene
2 genes 1 species 0 species
UBERON:000728510210
somite 1.0075.302 genes 0 gene
1 gene 2 species 0 species
UBERON:000232920120
esophagus 1.0066.673 genes 0 gene
0 gene
3 species 0 species
UBERON:000104330030
right testis 1.0039.541 gene 0 gene
2 genes 1 species 0 species
UBERON:000453410210
upper leg mesenchyme 1.0086.111 gene 0 gene
2 genes 1 species 0 species
UBERON:000525410210
blood 0.0045.061 gene 1 gene 1 gene 1 species 1 species UBERON:000017811111
skeletal muscle tissue 1.0090.443 genes 0 gene
0 gene
3 species 0 species
UBERON:000113430030
integumental system 1.0055.143 genes 0 gene
0 gene
3 species 0 species
UBERON:000241630030
cardiovascular system 1.0055.143 genes 0 gene
0 gene
3 species 0 species
UBERON:000453530030
lateral rectus extra-ocular muscle 1.0083.341 gene 0 gene
2 genes 1 species 0 species
UBERON:000160310210
intestinal epithelium 1.0041.671 gene 0 gene
2 genes 1 species 0 species
UBERON:000127710210
mesentery of oesophagus 1.0062.501 gene 0 gene
2 genes 1 species 0 species
UBERON:000328310210
islet of Langerhans -1.0035.540 gene
2 genes 1 gene 0 species
2 species UBERON:000000602102
neural tube 1.0068.721 gene 0 gene
2 genes 1 species 0 species
UBERON:000104910210
pleura -1.0049.030 gene
1 gene 2 genes 0 species
1 species UBERON:000097701201
endocardial cushion -1.0039.650 gene
1 gene 2 genes 0 species
1 species UBERON:000206201201
cerebral hemisphere 1.0038.932 genes 0 gene
1 gene 2 species 0 species
UBERON:000186920120
appendicular skeleton 1.0077.271 gene 0 gene
2 genes 1 species 0 species
UBERON:000209110210
skeletal joint 1.0052.182 genes 0 gene
1 gene 2 species 0 species
UBERON:000098220120
post-anal tail 1.0061.531 gene 0 gene
2 genes 1 species 0 species
UBERON:000781210210
cerebellar cortex 1.0038.462 genes 0 gene
1 gene 2 species 0 species
UBERON:000212920120
cranial ganglion 1.0069.211 gene 0 gene
2 genes 1 species 0 species
UBERON:000171410210
liver 1.0046.323 genes 0 gene
0 gene
3 species 0 species
UBERON:000210730030
colon 0.0039.751 gene 1 gene 1 gene 1 species 1 species UBERON:000115511111
left testis 1.0039.741 gene 0 gene
2 genes 1 species 0 species
UBERON:000453310210
striatum 1.0038.421 gene 0 gene
2 genes 1 species 0 species
UBERON:000243510210
myocardium of ventricle -1.0039.700 gene
1 gene 2 genes 0 species
1 species UBERON:000108301201
presomitic mesoderm 0.0064.771 gene 1 gene 1 gene 1 species 1 species UBERON:000305911111
dorsal root ganglion -1.0072.930 gene
2 genes 1 gene 0 species
2 species UBERON:000004402102
ciliary body -1.0037.490 gene
1 gene 2 genes 0 species
1 species UBERON:000177501201
ear vesicle -1.0045.560 gene
1 gene 2 genes 0 species
1 species UBERON:000305101201
musculature 1.0080.773 genes 0 gene
0 gene
3 species 0 species
UBERON:000101530030
gall bladder -1.0021.990 gene
1 gene 2 genes 0 species
1 species UBERON:000211001201
atrioventricular valve -1.0039.640 gene
1 gene 2 genes 0 species
1 species UBERON:000213301201
renal system 1.0075.322 genes 0 gene
1 gene 2 species 0 species
UBERON:000100820120
gingiva -1.0056.210 gene
1 gene 2 genes 0 species
1 species UBERON:000182801201
zygote -1.0035.390 gene
1 gene 2 genes 0 species
1 species CL:000036501201
respiratory system 1.0055.532 genes 0 gene
1 gene 2 species 0 species
UBERON:000100420120
post-anal tail bud 1.0065.681 gene 0 gene
2 genes 1 species 0 species
UBERON:000253310210
upper arm mesenchyme 1.0063.631 gene 0 gene
2 genes 1 species 0 species
UBERON:000525810210
medulla oblongata 0.0073.151 gene 1 gene 1 gene 1 species 1 species UBERON:000189611111
pylorus -1.0073.400 gene
1 gene 2 genes 0 species
1 species UBERON:000116601201
caudate nucleus -1.0030.590 gene
1 gene 2 genes 0 species
1 species UBERON:000187301201
embryo 0.3378.112 genes 1 gene 0 gene
2 species 1 species UBERON:000092221021
superior rectus extraocular muscle 1.0087.501 gene 0 gene
2 genes 1 species 0 species
UBERON:000632310210
chordate pharynx 0.0057.881 gene 1 gene 1 gene 1 species 1 species UBERON:000104211111
optic fissure -1.0040.620 gene
1 gene 2 genes 0 species
1 species UBERON:000541201201
epithelial cell of pancreas -1.0072.760 gene
1 gene 2 genes 0 species
1 species CL:000008301201
hypothalamus 0.0043.201 gene 1 gene 1 gene 1 species 1 species UBERON:000189811111
nervous system 1.0059.243 genes 0 gene
0 gene
3 species 0 species
UBERON:000101630030
gingival epithelium -1.0074.590 gene
1 gene 2 genes 0 species
1 species UBERON:000194901201
otic placode 0.0056.211 gene 1 gene 1 gene 1 species 1 species UBERON:000306911111
cleaving embryo 0.0052.841 gene 1 gene 1 gene 1 species 1 species UBERON:000701011111
cornea 1.0045.271 gene 0 gene
2 genes 1 species 0 species
UBERON:000096410210
hindbrain 1.0053.302 genes 0 gene
1 gene 2 species 0 species
UBERON:000202820120
cranial nerve II -1.0038.760 gene
1 gene 2 genes 0 species
1 species UBERON:000094101201
stomach 1.0041.272 genes 0 gene
1 gene 2 species 0 species
UBERON:000094520120
pituitary gland 0.0043.271 gene 1 gene 1 gene 1 species 1 species UBERON:000000711111
inferior vagus X ganglion -1.0073.770 gene
1 gene 2 genes 0 species
1 species UBERON:000536301201
limb, paired fin 1.0086.433 genes 0 gene
0 gene
3 species 0 species
UBERON:0002101, UBERON:000253430030
blood vessel 1.0058.312 genes 0 gene
1 gene 2 species 0 species
UBERON:000198120120
putamen -1.0031.710 gene
1 gene 2 genes 0 species
1 species UBERON:000187401201
eyeball of camera-type eye 1.0038.602 genes 0 gene
1 gene 2 species 0 species
UBERON:001023020120
right ovary -1.0018.440 gene
1 gene 2 genes 0 species
1 species UBERON:000211801201
inferior rectus extraocular muscle 1.0087.501 gene 0 gene
2 genes 1 species 0 species
UBERON:000632210210
testis 0.3346.772 genes 1 gene 0 gene
2 species 1 species UBERON:000047321021
male reproductive system 1.0044.082 genes 0 gene
1 gene 2 species 0 species
UBERON:000007920120
intermediate mesoderm 1.0061.101 gene 0 gene
2 genes 1 species 0 species
UBERON:000306410210
pharyngeal arch 1.0075.752 genes 0 gene
1 gene 2 species 0 species
UBERON:000253920120
embryonic post-anal tail 1.0018.031 gene 0 gene
2 genes 1 species 0 species
UBERON:000714410210
peripheral nervous system 0.0059.591 gene 1 gene 1 gene 1 species 1 species UBERON:000001011111
fibroblast -1.0031.740 gene
1 gene 2 genes 0 species
1 species CL:000005701201
head 1.0064.973 genes 0 gene
0 gene
3 species 0 species
UBERON:000003330030
olfactory bulb 0.0069.291 gene 1 gene 1 gene 1 species 1 species UBERON:000226411111
heart left ventricle, primary heart field 0.0046.341 gene 1 gene 1 gene 1 species 1 species UBERON:0002084, UBERON:000414011111
diencephalon 1.0072.341 gene 0 gene
2 genes 1 species 0 species
UBERON:000189410210
lens of camera-type eye 1.0042.051 gene 0 gene
2 genes 1 species 0 species
UBERON:000096510210
collection of basal ganglia 1.0055.541 gene 0 gene
2 genes 1 species 0 species
UBERON:001001110210
male germ cell -1.0068.340 gene
1 gene 2 genes 0 species
1 species CL:000001501201
axial mesoderm 1.0058.311 gene 0 gene
2 genes 1 species 0 species
UBERON:000306810210
gonad 1.0061.522 genes 0 gene
1 gene 2 species 0 species
UBERON:000099120120
skin of hip -1.0047.690 gene
1 gene 2 genes 0 species
1 species UBERON:000155401201
female gonad -0.3339.681 gene 2 genes 0 gene
1 species 2 species UBERON:000099212012
head mesenchyme 1.0076.811 gene 0 gene
2 genes 1 species 0 species
UBERON:000525310210
ileum 1.0036.591 gene 0 gene
2 genes 1 species 0 species
UBERON:000211610210
cartilage tissue -1.0061.210 gene
1 gene 2 genes 0 species
1 species UBERON:000241801201
blastopore, primitive streak -1.0040.630 gene
1 gene 2 genes 0 species
1 species UBERON:0000100, UBERON:000434101201
thyroid gland 0.0076.181 gene 1 gene 1 gene 1 species 1 species UBERON:000204611111
midbrain tegmentum 1.0060.851 gene 0 gene
2 genes 1 species 0 species
UBERON:000194310210
superior oblique extraocular muscle 1.0075.001 gene 0 gene
2 genes 1 species 0 species
UBERON:000632110210
pectoral appendage musculature 1.0059.053 genes 0 gene
0 gene
3 species 0 species
UBERON:000726930030
choroid plexus of fourth ventricle 1.0065.801 gene 0 gene
2 genes 1 species 0 species
UBERON:000229010210
bone element 1.0041.613 genes 0 gene
0 gene
3 species 0 species
UBERON:000147430030
fundus of stomach -1.0036.630 gene
1 gene 2 genes 0 species
1 species UBERON:000116001201
cerebellum 1.0066.922 genes 0 gene
1 gene 2 species 0 species
UBERON:000203720120
pineal body -1.0040.470 gene
1 gene 2 genes 0 species
1 species UBERON:000190501201
cardiac ventricle 0.3375.212 genes 1 gene 0 gene
2 species 1 species UBERON:000208221021
camera-type eye 1.0088.232 genes 0 gene
1 gene 2 species 0 species
UBERON:000001920120
caudal tuberculum, substantia nigra -1.0040.070 gene
2 genes 1 gene 0 species
2 species UBERON:2000633, UBERON:000203802102
thymus 0.0071.281 gene 1 gene 1 gene 1 species 1 species UBERON:000237011111
motor neuron -1.0042.030 gene
1 gene 2 genes 0 species
1 species CL:000010001201
olfactory cortex 1.0056.241 gene 0 gene
2 genes 1 species 0 species
UBERON:000289410210
epithelium of lens -1.0039.680 gene
1 gene 2 genes 0 species
1 species UBERON:000180301201
1st arch mandibular component 1.0041.151 gene 0 gene
2 genes 1 species 0 species
UBERON:000723710210
Ammon's horn 0.0045.971 gene 1 gene 1 gene 1 species 1 species UBERON:000195411111
adrenal cortex -1.0073.920 gene
1 gene 2 genes 0 species
1 species UBERON:000123501201
aorta 0.0073.481 gene 1 gene 1 gene 1 species 1 species UBERON:000094711111
right kidney -1.0015.290 gene
1 gene 2 genes 0 species
1 species UBERON:000453901201
intestine 0.3343.832 genes 1 gene 0 gene
2 species 1 species UBERON:000016021021
hindlimb mesenchyme, mesenchyme pelvic fin 1.0056.241 gene 0 gene
2 genes 1 species 0 species
UBERON:0003860, UBERON:000393510210
myocardium -1.0062.590 gene
1 gene 2 genes 0 species
1 species UBERON:000234901201
blastula 1.0026.712 genes 0 gene
1 gene 2 species 0 species
UBERON:000030720120
dermomyotome 1.0073.071 gene 0 gene
2 genes 1 species 0 species
UBERON:000429010210
adipose tissue 1.0053.902 genes 0 gene
1 gene 2 species 0 species
UBERON:000101320120
kidney blood vessel -1.0063.320 gene
1 gene 2 genes 0 species
1 species UBERON:000351701201
spleen -0.3337.801 gene 2 genes 0 gene
1 species 2 species UBERON:000210612012
kidney 0.3348.742 genes 1 gene 0 gene
2 species 1 species UBERON:000211321021
pericardium 0.0073.881 gene 1 gene 1 gene 1 species 1 species UBERON:000240711111
inferior oblique extraocular muscle 1.0062.501 gene 0 gene
2 genes 1 species 0 species
UBERON:000632010210
1st arch mandibular mesenchyme 1.0066.661 gene 0 gene
2 genes 1 species 0 species
UBERON:000958410210
lung, swim bladder 0.3363.512 genes 1 gene 0 gene
2 species 1 species UBERON:0002048, UBERON:000686021021
cardiac atrium -1.0073.880 gene
2 genes 1 gene 0 species
2 species UBERON:000208102102
ventral horn of spinal cord -1.0038.710 gene
1 gene 2 genes 0 species
1 species UBERON:000225701201
pigmented layer of retina -1.0063.080 gene
2 genes 1 gene 0 species
2 species UBERON:000178202102
1st arch maxillary component -1.0041.060 gene
1 gene 2 genes 0 species
1 species UBERON:000723801201
heart 1.0051.533 genes 0 gene
0 gene
3 species 0 species
UBERON:000094830030
cranium 1.0057.101 gene 0 gene
2 genes 1 species 0 species
UBERON:000312810210
ileal epithelium 1.0070.431 gene 0 gene
2 genes 1 species 0 species
UBERON:000834510210
muscle organ 1.0092.843 genes 0 gene
0 gene
3 species 0 species
UBERON:000163030030
cranial muscle 1.0085.712 genes 0 gene
1 gene 2 species 0 species
UBERON:000237620120
olfactory epithelium -1.0043.800 gene
1 gene 2 genes 0 species
1 species UBERON:000199701201
pharyngeal arch mesenchymal region 1.0063.631 gene 0 gene
2 genes 1 species 0 species
UBERON:000949410210
meninx 1.0071.041 gene 0 gene
2 genes 1 species 0 species
UBERON:000236010210
aortic valve -1.0042.310 gene
1 gene 2 genes 0 species
1 species UBERON:000213701201
parathyroid gland, pharyngeal gill 1.0049.381 gene 0 gene
2 genes 1 species 0 species
UBERON:0001132, UBERON:000020610210
mesoderm 1.0076.381 gene 0 gene
2 genes 1 species 0 species
UBERON:000092610210
peritoneum -1.0073.570 gene
1 gene 2 genes 0 species
1 species UBERON:000235801201
left ovary -1.0020.150 gene
1 gene 2 genes 0 species
1 species UBERON:000211901201
presumptive mesoderm 1.0061.101 gene 0 gene
2 genes 1 species 0 species
UBERON:000660310210

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