We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0041.271 gene 0 gene
2 genes 1 species 0 species
UBERON:000220610210
vestibulocochlear ganglion 1.0076.551 gene 0 gene
2 genes 1 species 0 species
UBERON:000282710210
optic fissure -1.0040.620 gene
1 gene 2 genes 0 species
1 species UBERON:000541201201
epithelial cell of pancreas 1.0066.741 gene 0 gene
2 genes 1 species 0 species
CL:000008310210
semi-lunar valve 1.0037.771 gene 0 gene
2 genes 1 species 0 species
UBERON:000562310210
brain blood vessel -1.0039.180 gene
1 gene 2 genes 0 species
1 species UBERON:000349901201
hypothalamus 1.0075.392 genes 0 gene
1 gene 2 species 0 species
UBERON:000189820120
paraxial mesoderm 1.0059.801 gene 0 gene
2 genes 1 species 0 species
UBERON:000307710210
gingival epithelium 1.0071.261 gene 0 gene
2 genes 1 species 0 species
UBERON:000194910210
gastrula 0.0049.771 gene 1 gene 1 gene 1 species 1 species UBERON:000473411111
otic placode -1.0047.580 gene
1 gene 2 genes 0 species
1 species UBERON:000306901201
cleaving embryo 1.0054.562 genes 0 gene
1 gene 2 species 0 species
UBERON:000701020120
photoreceptor layer of retina 1.0092.862 genes 0 gene
1 gene 2 species 0 species
UBERON:000178720120
retinal neural layer 1.0085.372 genes 0 gene
1 gene 2 species 0 species
UBERON:000390220120
midbrain 1.0071.993 genes 0 gene
0 gene
3 species 0 species
UBERON:000189130030
cornea 1.0038.571 gene 0 gene
2 genes 1 species 0 species
UBERON:000096410210
hindbrain 1.0065.073 genes 0 gene
0 gene
3 species 0 species
UBERON:000202830030
stomach 1.0084.162 genes 0 gene
1 gene 2 species 0 species
UBERON:000094520120
pituitary gland 1.0087.652 genes 0 gene
1 gene 2 species 0 species
UBERON:000000720120
inferior vagus X ganglion 1.0071.191 gene 0 gene
2 genes 1 species 0 species
UBERON:000536310210
female reproductive system 1.0070.803 genes 0 gene
0 gene
3 species 0 species
UBERON:000047430030
epithelium of esophagus 1.0052.311 gene 0 gene
2 genes 1 species 0 species
UBERON:000197610210
pancreas 1.0075.472 genes 0 gene
1 gene 2 species 0 species
UBERON:000126420120
kidney epithelium 1.0065.362 genes 0 gene
1 gene 2 species 0 species
UBERON:000481920120
upper leg skin 1.0071.081 gene 0 gene
2 genes 1 species 0 species
UBERON:000426210210
extra-ocular muscle 1.0057.641 gene 0 gene
2 genes 1 species 0 species
UBERON:000160110210
limb, paired fin 1.0057.192 genes 0 gene
1 gene 2 species 0 species
UBERON:0002101, UBERON:000253420120
manus, pectoral fin radial bone -1.0053.690 gene
1 gene 2 genes 0 species
1 species UBERON:0002398, UBERON:200158601201
putamen 1.0080.251 gene 0 gene
2 genes 1 species 0 species
UBERON:000187410210
telencephalon 1.0047.382 genes 0 gene
1 gene 2 species 0 species
UBERON:000189320120
eyeball of camera-type eye 1.0038.603 genes 0 gene
0 gene
3 species 0 species
UBERON:001023030030
right ovary 1.0067.681 gene 0 gene
2 genes 1 species 0 species
UBERON:000211810210
testis 1.0060.963 genes 0 gene
0 gene
3 species 0 species
UBERON:000047330030
male reproductive system 1.0047.413 genes 0 gene
0 gene
3 species 0 species
UBERON:000007930030
multi-cellular organism 1.0079.693 genes 0 gene
0 gene
3 species 0 species
UBERON:000046830030
ventricular zone 1.0071.632 genes 0 gene
1 gene 2 species 0 species
UBERON:000305320120
skin epidermis 1.0048.501 gene 0 gene
2 genes 1 species 0 species
UBERON:000100310210
embryonic post-anal tail -1.0049.840 gene
1 gene 2 genes 0 species
1 species UBERON:000714401201
cochlear ganglion 1.0096.671 gene 0 gene
2 genes 1 species 0 species
UBERON:000039510210
central nervous system 1.0063.593 genes 0 gene
0 gene
3 species 0 species
UBERON:000101730030
fibroblast 1.0062.861 gene 0 gene
2 genes 1 species 0 species
CL:000005710210
iris -1.0038.860 gene
1 gene 2 genes 0 species
1 species UBERON:000176901201
head 1.0087.323 genes 0 gene
0 gene
3 species 0 species
UBERON:000003330030
choroid plexus epithelium -1.0039.040 gene
1 gene 2 genes 0 species
1 species UBERON:000391101201
trigeminal ganglion 0.0067.331 gene 1 gene 1 gene 1 species 1 species UBERON:000167511111
forebrain 1.0080.883 genes 0 gene
0 gene
3 species 0 species
UBERON:000189030030
caecum 1.0075.281 gene 0 gene
2 genes 1 species 0 species
UBERON:000115310210
diencephalon 1.0080.253 genes 0 gene
0 gene
3 species 0 species
UBERON:000189430030
olfactory bulb 0.0050.001 gene 1 gene 1 gene 1 species 1 species UBERON:000226411111
heart left ventricle, primary heart field 1.0080.672 genes 0 gene
1 gene 2 species 0 species
UBERON:0002084, UBERON:000414020120
lens of camera-type eye 1.0063.781 gene 0 gene
2 genes 1 species 0 species
UBERON:000096510210
ear 1.0045.402 genes 0 gene
1 gene 2 species 0 species
UBERON:000169020120
brain 1.0085.023 genes 0 gene
0 gene
3 species 0 species
UBERON:000095530030
male germ cell 1.0049.301 gene 0 gene
2 genes 1 species 0 species
CL:000001510210
upper arm skin 1.0075.921 gene 0 gene
2 genes 1 species 0 species
UBERON:000426310210
smooth muscle tissue 1.0078.141 gene 0 gene
2 genes 1 species 0 species
UBERON:000113510210
heart right ventricle 1.0077.022 genes 0 gene
1 gene 2 species 0 species
UBERON:000208020120
lip 1.0070.361 gene 0 gene
2 genes 1 species 0 species
UBERON:000183310210
skin of hip 1.0072.891 gene 0 gene
2 genes 1 species 0 species
UBERON:000155410210
female gonad 1.0067.873 genes 0 gene
0 gene
3 species 0 species
UBERON:000099230030
genitourinary system 1.0076.661 gene 0 gene
2 genes 1 species 0 species
UBERON:000412210210
ileum 1.0045.212 genes 0 gene
1 gene 2 species 0 species
UBERON:000211620120
cartilage tissue 1.0081.581 gene 0 gene
2 genes 1 species 0 species
UBERON:000241810210
blastopore, primitive streak -1.0040.630 gene
1 gene 2 genes 0 species
1 species UBERON:0000100, UBERON:000434101201
thyroid gland 1.0074.471 gene 0 gene
2 genes 1 species 0 species
UBERON:000204610210
adenohypophysis 1.0085.242 genes 0 gene
1 gene 2 species 0 species
UBERON:000219620120
choroid plexus of fourth ventricle -1.0057.420 gene
1 gene 2 genes 0 species
1 species UBERON:000229001201
larva 1.0053.611 gene 0 gene
2 genes 1 species 0 species
UBERON:000254810210
bone element 1.0037.953 genes 0 gene
0 gene
3 species 0 species
UBERON:000147430030
cerebellum 1.0062.222 genes 0 gene
1 gene 2 species 0 species
UBERON:000203720120
fundus of stomach 1.0081.351 gene 0 gene
2 genes 1 species 0 species
UBERON:000116010210
pineal body -1.0040.470 gene
1 gene 2 genes 0 species
1 species UBERON:000190501201
dermis -1.0038.570 gene
1 gene 2 genes 0 species
1 species UBERON:000206701201
cardiac ventricle 1.0079.173 genes 0 gene
0 gene
3 species 0 species
UBERON:000208230030
outflow tract 1.0053.711 gene 0 gene
2 genes 1 species 0 species
UBERON:000414510210
saccule of membranous labyrinth 1.0047.221 gene 0 gene
2 genes 1 species 0 species
UBERON:000185410210
camera-type eye 1.0041.223 genes 0 gene
0 gene
3 species 0 species
UBERON:000001930030
caudal tuberculum, substantia nigra 0.0073.241 gene 1 gene 1 gene 1 species 1 species UBERON:2000633, UBERON:000203811111
thymus 1.0064.892 genes 0 gene
1 gene 2 species 0 species
UBERON:000237020120
tendon 1.0087.591 gene 0 gene
2 genes 1 species 0 species
UBERON:000004310210
epithelium of lens -1.0039.680 gene
1 gene 2 genes 0 species
1 species UBERON:000180301201
internal carotid artery -1.0040.890 gene
1 gene 2 genes 0 species
1 species UBERON:000153201201
1st arch mandibular component -1.0041.150 gene
1 gene 2 genes 0 species
1 species UBERON:000723701201
Ammon's horn 1.0084.392 genes 0 gene
1 gene 2 species 0 species
UBERON:000195420120
epiblast (generic) -1.0032.790 gene
1 gene 2 genes 0 species
1 species UBERON:000253201201
adrenal cortex 1.0076.911 gene 0 gene
2 genes 1 species 0 species
UBERON:000123510210
sternocleidomastoid 1.0060.051 gene 0 gene
2 genes 1 species 0 species
UBERON:000112810210
brainstem 1.0038.792 genes 0 gene
1 gene 2 species 0 species
UBERON:000229820120
outer nuclear layer of retina 1.0061.102 genes 0 gene
1 gene 2 species 0 species
UBERON:000178920120
aorta 1.0094.792 genes 0 gene
1 gene 2 species 0 species
UBERON:000094720120
right kidney 1.0081.371 gene 0 gene
2 genes 1 species 0 species
UBERON:000453910210
somite 1.0059.121 gene 0 gene
2 genes 1 species 0 species
UBERON:000232910210
retina 1.0087.163 genes 0 gene
0 gene
3 species 0 species
UBERON:000096630030
intestine 1.0088.113 genes 0 gene
0 gene
3 species 0 species
UBERON:000016030030
esophagus 1.0082.252 genes 0 gene
1 gene 2 species 0 species
UBERON:000104320120
myocardium 1.0060.501 gene 0 gene
2 genes 1 species 0 species
UBERON:000234910210
blastula 1.0055.892 genes 0 gene
1 gene 2 species 0 species
UBERON:000030720120
right testis 1.0048.251 gene 0 gene
2 genes 1 species 0 species
UBERON:000453410210
blood 0.3356.842 genes 1 gene 0 gene
2 species 1 species UBERON:000017821021
adipose tissue 1.0092.722 genes 0 gene
1 gene 2 species 0 species
UBERON:000101320120
skeletal muscle tissue 1.0080.262 genes 0 gene
1 gene 2 species 0 species
UBERON:000113420120
spleen 1.0081.683 genes 0 gene
0 gene
3 species 0 species
UBERON:000210630030
kidney 1.0081.183 genes 0 gene
0 gene
3 species 0 species
UBERON:000211330030
pericardium 1.0071.992 genes 0 gene
1 gene 2 species 0 species
UBERON:000240720120
lung, swim bladder 1.0089.513 genes 0 gene
0 gene
3 species 0 species
UBERON:0002048, UBERON:000686030030
cardiac atrium 0.0074.301 gene 1 gene 1 gene 1 species 1 species UBERON:000208111111
ventral horn of spinal cord -1.0038.710 gene
1 gene 2 genes 0 species
1 species UBERON:000225701201
islet of Langerhans 1.0080.982 genes 0 gene
1 gene 2 species 0 species
UBERON:000000620120
neural tube 1.0054.951 gene 0 gene
2 genes 1 species 0 species
UBERON:000104910210
pleura 1.0070.931 gene 0 gene
2 genes 1 species 0 species
UBERON:000097710210
endocardial cushion -1.0039.650 gene
1 gene 2 genes 0 species
1 species UBERON:000206201201
cerebral hemisphere 1.0039.722 genes 0 gene
1 gene 2 species 0 species
UBERON:000186920120
pigmented layer of retina 0.0072.161 gene 1 gene 1 gene 1 species 1 species UBERON:000178211111
1st arch maxillary component -1.0041.060 gene
1 gene 2 genes 0 species
1 species UBERON:000723801201
cerebellar cortex 1.0071.552 genes 0 gene
1 gene 2 species 0 species
UBERON:000212920120
heart 1.0079.763 genes 0 gene
0 gene
3 species 0 species
UBERON:000094830030
liver 1.0085.933 genes 0 gene
0 gene
3 species 0 species
UBERON:000210730030
ileal epithelium -1.0073.240 gene
1 gene 2 genes 0 species
1 species UBERON:000834501201
colon 1.0077.522 genes 0 gene
1 gene 2 species 0 species
UBERON:000115520120
left testis 1.0049.081 gene 0 gene
2 genes 1 species 0 species
UBERON:000453310210
muscle organ 1.0089.393 genes 0 gene
0 gene
3 species 0 species
UBERON:000163030030
striatum 1.0042.472 genes 0 gene
1 gene 2 species 0 species
UBERON:000243520120
myocardium of ventricle 0.0039.701 gene 1 gene 1 gene 1 species 1 species UBERON:000108311111
optic vesicle 1.0060.141 gene 0 gene
2 genes 1 species 0 species
UBERON:000412810210
presomitic mesoderm -1.0052.910 gene
2 genes 1 gene 0 species
2 species UBERON:000305902102
olfactory epithelium -1.0043.850 gene
1 gene 2 genes 0 species
1 species UBERON:000199701201
dorsal root ganglion 1.0068.702 genes 0 gene
1 gene 2 species 0 species
UBERON:000004420120
aortic valve 1.0066.491 gene 0 gene
2 genes 1 species 0 species
UBERON:000213710210
ciliary body 0.0050.001 gene 1 gene 1 gene 1 species 1 species UBERON:000177511111
ear vesicle -1.0045.560 gene
1 gene 2 genes 0 species
1 species UBERON:000305101201
gall bladder 1.0074.151 gene 0 gene
2 genes 1 species 0 species
UBERON:000211010210
atrioventricular valve -1.0039.640 gene
1 gene 2 genes 0 species
1 species UBERON:000213301201
parathyroid gland, pharyngeal gill 1.0086.081 gene 0 gene
2 genes 1 species 0 species
UBERON:0001132, UBERON:000020610210
gingiva 1.0063.611 gene 0 gene
2 genes 1 species 0 species
UBERON:000182810210
peritoneum 1.0070.381 gene 0 gene
2 genes 1 species 0 species
UBERON:000235810210
zygote 1.0072.021 gene 0 gene
2 genes 1 species 0 species
CL:000036510210
medulla oblongata 0.0072.551 gene 1 gene 1 gene 1 species 1 species UBERON:000189611111
pylorus 1.0073.381 gene 0 gene
2 genes 1 species 0 species
UBERON:000116610210
artery 1.0049.982 genes 0 gene
1 gene 2 species 0 species
UBERON:000163720120
caudate nucleus 1.0081.571 gene 0 gene
2 genes 1 species 0 species
UBERON:000187310210
embryo 1.0061.793 genes 0 gene
0 gene
3 species 0 species
UBERON:000092230030
left ovary 1.0067.471 gene 0 gene
2 genes 1 species 0 species
UBERON:000211910210

Do not show this banner again