A. carolinensis Gene: RAB5A - ENSACAG00000000017 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000000017
NameRAB5A
DescriptionRAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9783]
OrganismAnolis carolinensis (green anole)
Synonym(s)rab5
Orthologs(s)16 orthologs
Paralog(s)61 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
393
  • 393
  • 2.44e3
98.05
  • 98.05
  • 87.91
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
454
  • 454
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
587
  • 587
97.09
  • 97.09
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
593
  • 593
97.06
  • 97.06
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
602
  • 602
97.02
  • 97.02
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
638
  • 638
96.84
  • 96.84
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
644
  • 644
96.81
  • 96.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
645
  • 645
96.80
  • 96.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
773
  • 773
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
874
  • 874
95.66
  • 95.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.14e3
  • 1.14e3
  • 1.85e3
94.35
  • 94.35
  • 90.81
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.45e3
  • 1.45e3
92.80
  • 92.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
92.50
  • 92.50
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.22e3
  • 2.22e3
  • 3.30e3
89.00
  • 89.00
  • 83.60
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000000017.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Opisthokonta2 genesCompare expression
Eukaryota61 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000000017.

Cross-references

EnsemblENSACAG00000000017 (RAB5A)
HGNCHGNC:9783 (RAB5A)
Uniprot/SPTREMBLG1K852, G1K852_ANOCA

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