A. carolinensis Gene: TAF1B - ENSACAG00000000152 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000000152
NameTAF1B
DescriptionTATA-box binding protein associated factor, RNA polymerase I, B [Source:HGNC Symbol;Acc:HGNC:11533]
OrganismAnolis carolinensis (green anole)
Synonym(s)raf1b, rafi63, sl1, tafi63
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.13e3
  • 3.13e3
84.46
  • 84.46
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.36e3
  • 3.36e3
83.30
  • 83.30
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.14e3
  • 7.14e3
64.53
  • 64.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.76e3
  • 7.76e3
61.49
  • 61.49
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.05e3
  • 8.05e3
  • 8.08e3
60.02
  • 60.02
  • 59.89
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.24e3
  • 8.24e3
59.10
  • 59.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
8.45e3
  • 8.45e3
58.06
  • 58.06
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.49e3
  • 8.49e3
  • 9.23e3
57.85
  • 57.85
  • 54.19
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.06e3
  • 9.06e3
  • 9.90e3
55.01
  • 55.01
  • 50.86
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.40e3
  • 9.40e3
53.32
  • 53.32
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
9.47e3
  • 9.47e3
52.96
  • 52.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
49.50
  • 49.50
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
46.11
  • 46.11
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.16e4
  • 1.16e4
42.40
  • 42.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000000152.

Cross-references

EnsemblENSACAG00000000152 (TAF1B)
HGNCHGNC:11533 (TAF1B)
Uniprot/SPTREMBLG1K8C0, G1K8C0_ANOCA

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