A. carolinensis Gene: PDGFA - ENSACAG00000000403 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000000403
NamePDGFA
Descriptionplatelet-derived growth factor alpha polypeptide [Source:HGNC Symbol;Acc:HGNC:8799]
OrganismAnolis carolinensis (green anole)
Synonym(s)pdgf-a, pdgf1
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
455
  • 455
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
694
  • 694
96.56
  • 96.56
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
868
  • 868
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.72e3
  • 1.72e3
  • 1.96e3
91.49
  • 91.49
  • 90.28
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.89e3
  • 1.89e3
90.62
  • 90.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
  • 5.48e3
88.56
  • 88.56
  • 72.80
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.43e3
  • 3.43e3
82.96
  • 82.96
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.47e3
  • 3.47e3
82.76
  • 82.76
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.93e3
  • 6.93e3
  • 9.49e3
65.62
  • 65.62
  • 52.88
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.16e3
  • 7.16e3
64.45
  • 64.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.34e3
  • 7.34e3
63.57
  • 63.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
61.23
  • 61.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.62e3
  • 8.62e3
57.20
  • 57.20
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
47.46
  • 47.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species17 genesCompare expression

Orthology information comes from OMA : ENSACAG00000000403.

Cross-references

EnsemblENSACAG00000000403 (PDGFA)
HGNCHGNC:8799 (PDGFA)
Uniprot/SPTREMBLH9G3P5, H9G3P5_ANOCA

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