A. carolinensis Gene: PTPDC1 - ENSACAG00000000669 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000000669
NamePTPDC1
Descriptionprotein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30184]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj37312, ptp9q22
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.95e3
  • 2.95e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.69e3
  • 3.69e3
81.69
  • 81.69
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.72e3
  • 3.72e3
81.52
  • 81.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.82e3
  • 3.82e3
  • 5.76e3
81.06
  • 81.06
  • 71.42
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.04e3
  • 4.04e3
79.93
  • 79.93
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.71e3
  • 4.71e3
76.60
  • 76.60
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.31e3
  • 6.31e3
  • 7.98e3
68.67
  • 68.67
  • 60.40
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.34e3
  • 7.34e3
63.56
  • 63.56
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.61e3
  • 7.61e3
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.27e3
  • 8.27e3
  • 9.23e3
58.95
  • 58.95
  • 54.18
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
9.51e3
  • 9.51e3
52.78
  • 52.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
50.32
  • 50.32
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
40.68
  • 40.68
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
39.62
  • 39.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000000669.

Cross-references

EnsemblENSACAG00000000669 (PTPDC1)
HGNCHGNC:30184 (PTPDC1)
Uniprot/SPTREMBLH9G3Z4, H9G3Z4_ANOCA

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