A. carolinensis Gene: PUM1 - ENSACAG00000000682 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000000682
NamePUM1
Descriptionpumilio RNA binding family member 1 [Source:HGNC Symbol;Acc:HGNC:14957]
OrganismAnolis carolinensis (green anole)
Synonym(s)kiaa0099, pumh1
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
828
  • 828
95.89
  • 95.89
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.11e3
  • 1.11e3
94.48
  • 94.48
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.29e3
  • 1.29e3
93.62
  • 93.62
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.43e3
  • 1.43e3
92.92
  • 92.92
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.32e3
  • 2.32e3
  • 2.72e3
88.50
  • 88.50
  • 86.50
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.49e3
  • 2.49e3
  • 4.54e3
87.67
  • 87.67
  • 77.46
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.50e3
  • 2.50e3
87.60
  • 87.60
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.68e3
  • 2.68e3
86.69
  • 86.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.77e3
  • 2.77e3
  • 3.23e3
86.23
  • 86.23
  • 83.95
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.84e3
  • 2.84e3
85.89
  • 85.89
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.04e3
  • 4.04e3
79.95
  • 79.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.15e3
  • 4.15e3
79.38
  • 79.38
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.06e3
  • 5.06e3
74.88
  • 74.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.10e3
  • 5.10e3
74.68
  • 74.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000000682.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000000682.

Cross-references

EnsemblENSACAG00000000682 (PUM1)
HGNCHGNC:14957 (PUM1)
Uniprot/SPTREMBLH9G4C8, H9G4C8_ANOCA

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