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A. carolinensis Gene: SAMSN1 - ENSACAG00000001084 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001084
NameSAMSN1
DescriptionSAM domain, SH3 domain and nuclear localization signals 1 [Source:HGNC Symbol;Acc:HGNC:10528]
OrganismAnolis carolinensis (green anole)
Synonym(s)hacs1, nash1, sash2, sh3d6b, sly2
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
88.54
  • 88.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.38e3
  • 3.38e3
83.25
  • 83.25
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.68e3
  • 9.68e3
51.94
  • 51.94
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
  • 1.31e4
44.01
  • 44.01
  • 34.78
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
  • 1.28e4
43.39
  • 43.39
  • 36.21
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
41.68
  • 41.68
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
34.19
  • 34.19
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
33.67
  • 33.67
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
32.89
  • 32.89
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
23.85
  • 23.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000001084.

Cross-references

EnsemblENSACAG00000001084 (SAMSN1)
HGNCHGNC:10528 (SAMSN1)
Uniprot/SPTREMBLH9G4Q6, H9G4Q6_ANOCA

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