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A. carolinensis Gene: ACTC1 - ENSACAG00000001104 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001104
NameACTC1
Descriptionactin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
OrganismAnolis carolinensis (green anole)
Synonym(s)actc, cmd1r
Orthologs(s)12 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
31.0
  • 31.0
  • 47.0
99.85
  • 99.85
  • 99.77
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
548
  • 548
  • 936
97.28
  • 97.28
  • 95.36
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.11e3
  • 2.11e3
  • 3.67e3
89.55
  • 89.55
  • 81.77
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.24e3
  • 5.24e3
73.98
  • 73.98
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
59.01
  • 59.01
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
9.40e3
  • 9.40e3
53.32
  • 53.32
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.04e4
  • 1.04e4
48.27
  • 48.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
  • 1.65e4
23.89
  • 23.89
  • 17.97
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSACAG00000001104 (ACTC1)
HGNCHGNC:143 (ACTC1)
Uniprot/SPTREMBLG1K932, G1K932_ANOCA

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