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A. carolinensis Gene: LSM10 - ENSACAG00000001231 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001231
NameLSM10
DescriptionLSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
OrganismAnolis carolinensis (green anole)
Synonym(s)mgc15749
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
470
  • 470
  • 6.12e3
97.67
  • 97.67
  • 69.60
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
563
  • 563
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
629
  • 629
96.88
  • 96.88
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
643
  • 643
96.81
  • 96.81
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
773
  • 773
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
871
  • 871
95.68
  • 95.68
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
93.95
  • 93.95
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.62e3
  • 1.62e3
  • 2.65e3
91.97
  • 91.97
  • 86.83
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.21e3
  • 2.21e3
  • 2.82e3
89.03
  • 89.03
  • 85.99
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.01e3
  • 3.01e3
  • 1.02e4
85.07
  • 85.07
  • 49.45
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.04e3
  • 3.04e3
84.90
  • 84.90
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.67e3
  • 4.67e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
43.87
  • 43.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000001231.

Cross-references

EnsemblENSACAG00000001231 (LSM10)
HGNCHGNC:17562 (LSM10)
Uniprot/SPTREMBLH9G4T7, H9G4T7_ANOCA

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