A. carolinensis Gene: DDX58 - ENSACAG00000001354 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001354
NameDDX58
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Source:HGNC Symbol;Acc:HGNC:19102]
OrganismAnolis carolinensis (green anole)
Synonym(s)dkfzp434j1111, flj13599, rig-i
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
  • 2.85e3
88.88
  • 88.88
  • 85.85
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.82e3
  • 2.82e3
85.99
  • 85.99
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
4.10e3
  • 4.10e3
79.64
  • 79.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.17e3
  • 5.17e3
74.31
  • 74.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.48e3
  • 5.48e3
  • 5.70e3
72.80
  • 72.80
  • 71.69
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.17e3
  • 6.17e3
69.36
  • 69.36
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.55e3
  • 6.55e3
  • 1.21e4
67.51
  • 67.51
  • 39.79
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.88e3
  • 8.88e3
55.91
  • 55.91
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
32.26
  • 32.26
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
28.55
  • 28.55
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
27.72
  • 27.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000001354.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000001354.

Cross-references

EnsemblENSACAG00000001354 (DDX58)
HGNCHGNC:19102 (DDX58)
Uniprot/SPTREMBLH9G577, H9G577_ANOCA

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