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A. carolinensis Gene: PCBD2 - ENSACAG00000001400 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001400
NamePCBD2
Descriptionpterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 [Source:HGNC Symbol;Acc:HGNC:24474]
OrganismAnolis carolinensis (green anole)
Synonym(s)dcoh2, dcohm
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
219
  • 219
  • 365
98.92
  • 98.92
  • 98.19
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
759
  • 759
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
792
  • 792
96.07
  • 96.07
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
909
  • 909
95.49
  • 95.49
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.30e3
  • 1.30e3
93.55
  • 93.55
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.45e3
  • 1.45e3
  • 3.14e3
92.80
  • 92.80
  • 84.42
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.69e3
  • 1.69e3
91.61
  • 91.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.02e3
  • 2.02e3
89.98
  • 89.98
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.16e3
  • 2.16e3
89.26
  • 89.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.17e3
  • 2.17e3
  • 2.53e3
89.23
  • 89.23
  • 87.45
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.44e3
  • 2.44e3
  • 4.04e3
87.90
  • 87.90
  • 79.93
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.47e3
  • 2.47e3
87.76
  • 87.76
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.51e3
  • 2.51e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
3.28e3
  • 3.28e3
83.70
  • 83.70
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.56e3
  • 3.56e3
82.33
  • 82.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Bilateria15 species15 genesCompare expression

Orthology information comes from OMA : ENSACAG00000001400.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000001400.

Cross-references

EnsemblENSACAG00000001400 (PCBD2)
HGNCHGNC:24474 (PCBD2)
Uniprot/SPTREMBLH9G524, H9G524_ANOCA

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