A. carolinensis Gene: SCGN - ENSACAG00000001432 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001432
NameSCGN
Descriptionsecretagogin, EF-hand calcium binding protein [Source:HGNC Symbol;Acc:HGNC:16941]
OrganismAnolis carolinensis (green anole)
Synonym(s)calbl, dj501n12.8, secret, segn
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
7.19e3
  • 7.19e3
64.29
  • 64.29
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
47.95
  • 47.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
  • 1.29e4
41.54
  • 41.54
  • 35.99
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
36.42
  • 36.42
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
34.40
  • 34.40
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
34.15
  • 34.15
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
  • 1.39e4
33.66
  • 33.66
  • 31.02
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
33.02
  • 33.02
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
29.73
  • 29.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000001432.

Cross-references

EnsemblENSACAG00000001432 (SCGN)
HGNCHGNC:16941 (SCGN)
Uniprot/SPTREMBLG1K9J9, G1K9J9_ANOCA

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