A. carolinensis Gene: LYSMD2 - ENSACAG00000001473 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001473
NameLYSMD2
DescriptionLysM, putative peptidoglycan-binding, domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28571]
OrganismAnolis carolinensis (green anole)
Synonym(s)mgc35274
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.12e3
  • 1.12e3
94.42
  • 94.42
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.13e3
  • 1.13e3
94.41
  • 94.41
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.83e3
  • 1.83e3
90.92
  • 90.92
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.18e3
  • 2.18e3
89.18
  • 89.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
2.21e3
  • 2.21e3
89.02
  • 89.02
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
  • 2.40e3
88.86
  • 88.86
  • 88.07
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.58e3
  • 2.58e3
  • 1.07e4
87.19
  • 87.19
  • 47.01
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.07e3
  • 3.07e3
  • 6.89e3
84.79
  • 84.79
  • 65.81
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.56e3
  • 3.56e3
  • 4.26e3
82.34
  • 82.34
  • 78.87
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.67e3
  • 3.67e3
81.77
  • 81.77
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.12e3
  • 6.12e3
69.63
  • 69.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.12e3
  • 6.12e3
69.60
  • 69.60
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.21e3
  • 7.21e3
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.91e3
  • 7.91e3
60.71
  • 60.71
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
8.89e3
  • 8.89e3
55.88
  • 55.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSACAG00000001473 (LYSMD2)
HGNCHGNC:28571 (LYSMD2)
Uniprot/SPTREMBLH9G552, H9G552_ANOCA

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