A. carolinensis Gene: UPF3A - ENSACAG00000001540 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001540
NameUPF3A
DescriptionUPF3 regulator of nonsense transcripts homolog A (yeast) [Source:HGNC Symbol;Acc:HGNC:20332]
OrganismAnolis carolinensis (green anole)
Synonym(s)hupf3a, rent3a, upf3
Orthologs(s)9 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.16e3
  • 1.16e3
94.26
  • 94.26
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.26e3
  • 3.26e3
  • 5.03e3
83.81
  • 83.81
  • 75.04
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.07e3
  • 9.07e3
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
48.88
  • 48.88
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
46.17
  • 46.17
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
38.89
  • 38.89
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
38.40
  • 38.40
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
34.93
  • 34.93
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
33.70
  • 33.70
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
33.65
  • 33.65
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
31.45
  • 31.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
29.86
  • 29.86
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
  • 1.46e4
28.70
  • 28.70
  • 27.76
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSACAG00000001540 (UPF3A)
HGNCHGNC:20332 (UPF3A)
Uniprot/SPTREMBLG1K9N0, G1K9N0_ANOCA

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