A. carolinensis Gene: SS18 - ENSACAG00000001853 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001853
NameSS18
Descriptionsynovial sarcoma translocation, chromosome 18 [Source:HGNC Symbol;Acc:HGNC:11340]
OrganismAnolis carolinensis (green anole)
Synonym(s)ssxt, syt
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
870
  • 870
95.69
  • 95.69
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
943
  • 943
  • 2.50e3
95.32
  • 95.32
  • 87.60
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.07e3
  • 1.07e3
94.71
  • 94.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.29e3
  • 1.29e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.42e3
  • 1.42e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.01e3
  • 2.01e3
  • 2.26e3
90.01
  • 90.01
  • 88.77
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.10e3
  • 3.10e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.36e3
  • 3.36e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.21e3
  • 4.21e3
  • 4.41e3
79.12
  • 79.12
  • 78.12
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.56e3
  • 4.56e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.62e3
  • 4.62e3
77.06
  • 77.06
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
4.85e3
  • 4.85e3
75.94
  • 75.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.87e3
  • 4.87e3
  • 5.56e3
75.83
  • 75.83
  • 72.41
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
68.44
  • 68.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000001853.

Cross-references

EnsemblENSACAG00000001853 (SS18)
HGNCHGNC:11340 (SS18)
Uniprot/SPTREMBLG1KA52, G1KA52_ANOCA

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