A. carolinensis Gene: LCMT1 - ENSACAG00000001927 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000001927
NameLCMT1
Descriptionleucine carboxyl methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:17557]
OrganismAnolis carolinensis (green anole)
Synonym(s)cgi-68, ppmt1
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.17e3
  • 1.17e3
  • 1.51e3
94.20
  • 94.20
  • 92.50
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.70e3
  • 1.70e3
  • 2.59e3
91.57
  • 91.57
  • 87.17
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.05e3
  • 2.05e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
  • 5.31e3
83.81
  • 83.81
  • 73.65
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.45e3
  • 3.45e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.88e3
  • 3.88e3
80.73
  • 80.73
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
4.80e3
  • 4.80e3
76.18
  • 76.18
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
4.96e3
  • 4.96e3
  • 1.10e4
75.38
  • 75.38
  • 45.48
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.06e3
  • 6.06e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
6.28e3
  • 6.28e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.32e3
  • 6.32e3
68.60
  • 68.60
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.66e3
  • 6.66e3
66.92
  • 66.92
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.12e3
  • 7.12e3
64.66
  • 64.66
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.60e3
  • 7.60e3
62.27
  • 62.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.41e3
  • 8.41e3
58.23
  • 58.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000001927.

Cross-references

EnsemblENSACAG00000001927 (LCMT1)
HGNCHGNC:17557 (LCMT1)
Uniprot/SPTREMBLH9G5U3, H9G5U3_ANOCA

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