A. carolinensis Gene: SERPINH1 - ENSACAG00000002229 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000002229
NameSERPINH1
Descriptionserpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) [Source:HGNC Symbol;Acc:HGNC:1546]
OrganismAnolis carolinensis (green anole)
Synonym(s)cbp1, cbp2, colligen, hsp47, serpinh2
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
886
  • 886
  • 1.05e3
95.61
  • 95.61
  • 94.80
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.45e3
  • 1.45e3
  • 3.01e3
92.83
  • 92.83
  • 85.06
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.68e3
  • 1.68e3
91.66
  • 91.66
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.04e3
  • 3.04e3
84.90
  • 84.90
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
3.22e3
  • 3.22e3
  • 1.53e4
84.01
  • 84.01
  • 24.09
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.92e3
  • 3.92e3
80.56
  • 80.56
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.27e3
  • 5.27e3
73.85
  • 73.85
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.39e3
  • 6.39e3
68.26
  • 68.26
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.84e3
  • 6.84e3
66.04
  • 66.04
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.25e3
  • 7.25e3
64.01
  • 64.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
61.58
  • 61.58
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.47e3
  • 8.47e3
57.95
  • 57.95
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
9.07e3
  • 9.07e3
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.38e4
41.63
  • 41.63
  • 31.57
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000002229.

Cross-references

EnsemblENSACAG00000002229 (SERPINH1)
HGNCHGNC:1546 (SERPINH1)
Uniprot/SPTREMBLH9G627, H9G627_ANOCA

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