A. carolinensis Gene: CDH1 - ENSACAG00000002779 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000002779
NameCDH1
Descriptioncadherin 1, type 1 [Source:HGNC Symbol;Acc:HGNC:1748]
OrganismAnolis carolinensis (green anole)
Synonym(s)cd324, uvo, uvomorulin
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.31e3
  • 2.31e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
86.79
  • 86.79
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.29e3
  • 3.29e3
83.65
  • 83.65
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.74e3
  • 3.74e3
81.44
  • 81.44
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.90e3
  • 3.90e3
80.65
  • 80.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.34e3
  • 4.34e3
78.48
  • 78.48
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
5.30e3
  • 5.30e3
73.68
  • 73.68
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.61e3
  • 5.61e3
72.15
  • 72.15
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.47e3
  • 6.47e3
67.89
  • 67.89
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.40e4
41.95
  • 41.95
  • 30.27
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.37e4
31.95
  • 31.95
  • 31.84
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.78e4
21.48
  • 21.48
  • 11.75
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSACAG00000002779.

Cross-references

EnsemblENSACAG00000002779 (CDH1)
HGNCHGNC:1748 (CDH1)
Uniprot/SPTREMBLH9G700, H9G700_ANOCA

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