A. carolinensis Gene: NR1D1 - ENSACAG00000002847 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000002847
NameNR1D1
Descriptionnuclear receptor subfamily 1 group D member 1 [Source:HGNC Symbol;Acc:HGNC:7962]
OrganismAnolis carolinensis (green anole)
Synonym(s)ear-1, hrev, rev-erbaalpha, thra1, thral
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.34e3
  • 3.34e3
  • 1.78e4
83.44
  • 83.44
  • 11.87
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.80e3
  • 3.80e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.61e3
  • 6.61e3
67.19
  • 67.19
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.15e3
  • 7.15e3
  • 8.75e3
64.49
  • 64.49
  • 56.56
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.84e3
  • 7.84e3
  • 1.02e4
61.10
  • 61.10
  • 49.25
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.20e3
  • 9.20e3
  • 1.23e4
54.32
  • 54.32
  • 38.77
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.56e3
  • 9.56e3
52.53
  • 52.53
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
47.11
  • 47.11
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
42.46
  • 42.46
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
39.72
  • 39.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000002847.

Cross-references

EnsemblENSACAG00000002847 (NR1D1)
HGNCHGNC:7962 (NR1D1)
Uniprot/SPTREMBLG1KB93, G1KB93_ANOCA

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