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A. carolinensis Gene: VPS52 - ENSACAG00000002994 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000002994
NameVPS52
DescriptionVPS52 GARP complex subunit [Source:HGNC Symbol;Acc:HGNC:10518]
OrganismAnolis carolinensis (green anole)
Synonym(s)are1, sacm2l
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.09e3
  • 2.09e3
  • 3.63e3
89.63
  • 89.63
  • 81.96
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.34e3
  • 2.34e3
  • 5.57e3
88.41
  • 88.41
  • 72.33
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
82.23
  • 82.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.97e3
  • 4.97e3
  • 7.20e3
75.30
  • 75.30
  • 64.28
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.30e3
  • 5.30e3
73.71
  • 73.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.15e3
  • 6.15e3
69.47
  • 69.47
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.42e3
  • 6.42e3
68.11
  • 68.11
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
67.73
  • 67.73
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.50e3
  • 7.50e3
62.78
  • 62.78
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
62.46
  • 62.46
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.61e3
  • 7.61e3
62.24
  • 62.24
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.89e3
  • 7.89e3
60.83
  • 60.83
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.41e3
  • 8.41e3
58.22
  • 58.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSACAG00000002994.

Cross-references

EnsemblENSACAG00000002994 (VPS52)
HGNCHGNC:10518 (VPS52)
Uniprot/SPTREMBLH9G6Y6, H9G6Y6_ANOCA

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