A. carolinensis Gene: SMARCA5 - ENSACAG00000003038 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000003038
NameSMARCA5
DescriptionSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
OrganismAnolis carolinensis (green anole)
Synonym(s)hiswi, hsnf2h, iswi

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
493
  • 493
  • 1.46e3
97.56
  • 97.56
  • 92.74
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
590
  • 590
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
605
  • 605
97.00
  • 97.00
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.84e3
  • 1.84e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.21e3
  • 2.21e3
89.06
  • 89.06
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.22e3
  • 2.22e3
88.97
  • 88.97
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.29e3
  • 2.29e3
88.63
  • 88.63
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.10e3
  • 3.10e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.27e3
  • 5.27e3
  • 8.88e3
73.82
  • 73.82
  • 55.93
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.32e3
  • 6.32e3
68.61
  • 68.61
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.97e3
  • 6.97e3
65.38
  • 65.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.85e3
  • 7.85e3
61.05
  • 61.05
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.97e3
  • 7.97e3
  • 9.37e3
60.43
  • 60.43
  • 53.47
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
50.17
  • 50.17
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 1.22e4
46.32
  • 46.32
  • 39.62
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000003038 (SMARCA5)
HGNCHGNC:11101 (SMARCA5)
Uniprot/SPTREMBLG1KBM0, G1KBM0_ANOCA

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