A. carolinensis Gene: HMHA1 - ENSACAG00000003070 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000003070
NameHMHA1
Descriptionhistocompatibility (minor) HA-1 [Source:HGNC Symbol;Acc:HGNC:17102]
OrganismAnolis carolinensis (green anole)
Synonym(s)arhgap45, ha-1, kiaa0223
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
86.79
  • 86.79
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.65e3
  • 5.65e3
71.95
  • 71.95
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.26e3
  • 7.26e3
63.95
  • 63.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.32e3
  • 7.32e3
  • 8.64e3
63.68
  • 63.68
  • 57.13
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
61.21
  • 61.21
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.72e3
  • 8.72e3
  • 1.21e4
56.70
  • 56.70
  • 40.17
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.41e4
32.88
  • 32.88
  • 30.04
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
26.01
  • 26.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species17 genesCompare expression

Orthology information comes from OMA : ENSACAG00000003070.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000003070.

Cross-references

EnsemblENSACAG00000003070 (HMHA1)
HGNCHGNC:17102 (HMHA1)
Uniprot/SPTREMBLH9G744, H9G744_ANOCA

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