A. carolinensis Gene: CLHC1 - ENSACAG00000003288 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000003288
NameCLHC1
Descriptionclathrin heavy chain linker domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26453]
OrganismAnolis carolinensis (green anole)
Synonym(s)c2orf63, flj31438
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.05e3
  • 6.05e3
  • 7.32e3
69.96
  • 69.96
  • 63.68
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.37e3
  • 6.37e3
68.39
  • 68.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.98e3
  • 6.98e3
65.36
  • 65.36
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.17e3
  • 7.17e3
  • 1.30e4
64.39
  • 64.39
  • 35.61
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.15e3
  • 8.15e3
  • 8.90e3
59.53
  • 59.53
  • 55.83
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.24e3
  • 8.24e3
59.10
  • 59.10
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.74e3
  • 8.74e3
56.62
  • 56.62
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
9.39e3
  • 9.39e3
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.90e3
  • 9.90e3
50.83
  • 50.83
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
49.69
  • 49.69
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
49.40
  • 49.40
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
47.63
  • 47.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
47.42
  • 47.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000003288.

Cross-references

EnsemblENSACAG00000003288 (CLHC1)
HGNCHGNC:26453 (CLHC1)
Uniprot/SPTREMBLG1KBQ6, G1KBQ6_ANOCA

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