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A. carolinensis Gene: MAP1LC3C - ENSACAG00000003394 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000003394
NameMAP1LC3C
Descriptionmicrotubule associated protein 1 light chain 3 gamma [Source:HGNC Symbol;Acc:HGNC:13353]
OrganismAnolis carolinensis (green anole)
Synonym(s)atg8j
Orthologs(s)13 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
45.00
  • 45.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
37.64
  • 37.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
37.50
  • 37.50
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
36.72
  • 36.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.31e4
35.74
  • 35.74
  • 35.00
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
26.88
  • 26.88
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
25.62
  • 25.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota10 species11 genesCompare expression
Tetrapoda11 species12 genesCompare expression
Euteleostomi12 species13 genesCompare expression

Orthology information comes from OMA : ENSACAG00000003394.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eumetazoa1 geneCompare expression
Opisthokonta5 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000003394.

Cross-references

EnsemblENSACAG00000003394 (MAP1LC3C)
HGNCHGNC:13353 (MAP1LC3C)
Uniprot/SPTREMBLG1KBV0, G1KBV0_ANOCA

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