A. carolinensis Gene: SMPD4 - ENSACAG00000003501 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000003501
NameSMPD4
Descriptionsphingomyelin phosphodiesterase 4 [Source:HGNC Symbol;Acc:HGNC:32949]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj20297, flj20756, kiaa1418, net13, nsmase-3, nsmase3
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.65e3
  • 2.65e3
  • 6.22e3
86.84
  • 86.84
  • 69.13
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.80e3
  • 2.80e3
  • 5.59e3
86.12
  • 86.12
  • 72.27
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.80e3
  • 2.80e3
86.10
  • 86.10
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.41e3
  • 3.41e3
83.07
  • 83.07
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.36e3
  • 4.36e3
78.37
  • 78.37
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.39e3
  • 4.39e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.29e3
  • 5.29e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.63e3
  • 5.63e3
72.08
  • 72.08
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.42e3
  • 6.42e3
68.15
  • 68.15
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
6.75e3
  • 6.75e3
66.48
  • 66.48
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.33e3
  • 7.33e3
63.60
  • 63.60
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.29e3
  • 8.29e3
  • 1.06e4
58.86
  • 58.86
  • 47.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.49e3
  • 9.49e3
52.88
  • 52.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota13 species14 genesCompare expression
Tetrapoda14 species15 genesCompare expression
Euteleostomi15 species16 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSACAG00000003501.

Cross-references

EnsemblENSACAG00000003501 (SMPD4)
HGNCHGNC:32949 (SMPD4)
Uniprot/SPTREMBLH9G7P1, H9G7P1_ANOCA

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