A. carolinensis Gene: SMAD1 - ENSACAG00000003544 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000003544
NameSMAD1
DescriptionSMAD family member 1 [Source:HGNC Symbol;Acc:HGNC:6767]
OrganismAnolis carolinensis (green anole)
Synonym(s)jv4-1, madh1, madr1
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.51e3
  • 1.51e3
92.49
  • 92.49
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
92.13
  • 92.13
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.54e3
  • 2.54e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.06e3
  • 3.06e3
84.79
  • 84.79
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.93e3
  • 3.93e3
80.49
  • 80.49
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.14e3
  • 4.14e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.85e3
  • 4.85e3
75.94
  • 75.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.33e3
  • 5.33e3
  • 5.86e3
73.53
  • 73.53
  • 70.92
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.69e3
  • 5.69e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.76e3
  • 5.76e3
  • 6.09e3
71.39
  • 71.39
  • 69.78
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.61e3
  • 6.61e3
  • 6.89e3
67.19
  • 67.19
  • 65.78
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.07e3
  • 7.07e3
64.88
  • 64.88
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.16e3
  • 7.16e3
64.45
  • 64.45
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.67e3
  • 8.67e3
56.94
  • 56.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSACAG00000003544.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Metazoa2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000003544.

Cross-references

EnsemblENSACAG00000003544 (SMAD1)
HGNCHGNC:6767 (SMAD1)
Uniprot/SPTREMBLG1KC06, G1KC06_ANOCA

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