Gene: ATG13 - ENSACAG00000003943 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000003943
Name	ATG13
Description	autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
Organism	Anolis carolinensis (green anole)
Synonym(s)	kiaa0652
Orthologs(s)	19 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	3.68e3 3.68e3 3.98e3	81.75 81.75 80.26	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	3.76e3 3.76e3 3.99e3	81.35 81.35 80.19	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	4.28e3 4.28e3 4.46e3	78.76 78.76 77.85	AEIR AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	5.10e3 5.10e3	74.68 74.68	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	5.16e3 5.16e3	74.39 74.39	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.54e3 5.54e3	72.49 72.49	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	6.38e3 6.38e3	68.34 68.34	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	6.44e3 6.44e3	68.01 68.01	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	6.63e3 6.63e3	67.09 67.09	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	6.72e3 6.72e3	66.66 66.66	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	6.84e3 6.84e3	66.05 66.05	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.84e3 6.84e3	66.05 66.05	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	7.05e3 7.05e3	64.99 64.99	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	8.79e3 8.79e3	56.35 56.35	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000008347 ATG13	Compare expression	[+]
Amniota	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	17 genes ENSG00000175224 ATG13 ENSMUSG00000027244 Atg13 ENSPTRG00000003549 ATG13 ENSGGOG00000005689 ATG13 ENSMMUG00000019672 ATG13 ENSRNOG00000016984 Atg13 ENSBTAG00000017325 ATG13 ENSSSCG00000013257 ATG13 ENSECAG00000024606 ATG13 ENSOCUG00000016144 ATG13 ENSCAFG00000009170 ATG13 ENSFCAG00000013637 ATG13 ENSCPOG00000013042 ATG13 ENSEEUG00000010239 ATG13 ENSMODG00000019893 ATG13 ENSOANG00000006550 ATG13 ENSGALG00000008347 ATG13	Compare expression	[+]
Tetrapoda	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000175224 ATG13 ENSMUSG00000027244 Atg13 ENSPTRG00000003549 ATG13 ENSGGOG00000005689 ATG13 ENSMMUG00000019672 ATG13 ENSRNOG00000016984 Atg13 ENSBTAG00000017325 ATG13 ENSSSCG00000013257 ATG13 ENSECAG00000024606 ATG13 ENSOCUG00000016144 ATG13 ENSCAFG00000009170 ATG13 ENSFCAG00000013637 ATG13 ENSCPOG00000013042 ATG13 ENSEEUG00000010239 ATG13 ENSMODG00000019893 ATG13 ENSOANG00000006550 ATG13 ENSGALG00000008347 ATG13 ENSXETG00000001983 atg13	Compare expression	[+]
Euteleostomi	19 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	19 genes ENSG00000175224 ATG13 ENSMUSG00000027244 Atg13 ENSDARG00000036040 atg13 ENSPTRG00000003549 ATG13 ENSGGOG00000005689 ATG13 ENSMMUG00000019672 ATG13 ENSRNOG00000016984 Atg13 ENSBTAG00000017325 ATG13 ENSSSCG00000013257 ATG13 ENSECAG00000024606 ATG13 ENSOCUG00000016144 ATG13 ENSCAFG00000009170 ATG13 ENSFCAG00000013637 ATG13 ENSCPOG00000013042 ATG13 ENSEEUG00000010239 ATG13 ENSMODG00000019893 ATG13 ENSOANG00000006550 ATG13 ENSGALG00000008347 ATG13 ENSXETG00000001983 atg13	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000003943.

Cross-references

Ensembl	ENSACAG00000003943 (ATG13)
HGNC	HGNC:29091 (ATG13)
Uniprot/SPTREMBL	G1KCG7, G1KCG7_ANOCA