A. carolinensis Gene: LSM6 - ENSACAG00000004004 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004004
NameLSM6
DescriptionLSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17017]
OrganismAnolis carolinensis (green anole)
Synonym(s)ydr378c

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
117
  • 117
  • 126
99.42
  • 99.42
  • 99.38
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
119
  • 119
99.42
  • 99.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
215
  • 215
98.94
  • 98.94
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
247
  • 247
98.78
  • 98.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
253
  • 253
98.75
  • 98.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
392
  • 392
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
400
  • 400
  • 1.44e3
98.02
  • 98.02
  • 92.85
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
404
  • 404
  • 684
98.00
  • 98.00
  • 96.61
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
564
  • 564
  • 1.67e3
97.20
  • 97.20
  • 91.74
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
754
  • 754
96.26
  • 96.26
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.17e3
  • 1.17e3
94.20
  • 94.20
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.29e3
  • 2.29e3
88.62
  • 88.62
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.37e3
  • 2.37e3
88.23
  • 88.23
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.85e3
  • 2.85e3
85.85
  • 85.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000004004 (LSM6)
HGNCHGNC:17017 (LSM6)
Uniprot/SPTREMBLG1KCF6, G1KCF6_ANOCA

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