A. carolinensis Gene: HDAC1 - ENSACAG00000004057 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004057
NameHDAC1
Descriptionhistone deacetylase 1 [Source:HGNC Symbol;Acc:HGNC:4852]
OrganismAnolis carolinensis (green anole)
Synonym(s)gon-10, hd1, rpd3l1
Orthologs(s)26 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
617
  • 617
96.94
  • 96.94
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
710
  • 710
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
746
  • 746
96.30
  • 96.30
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
809
  • 809
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
  • 2.96e3
89.23
  • 89.23
  • 85.32
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.35e3
  • 2.35e3
  • 4.64e3
88.34
  • 88.34
  • 76.98
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.53e3
  • 2.53e3
87.43
  • 87.43
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.70e3
  • 2.70e3
86.62
  • 86.62
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.17e3
  • 3.17e3
84.25
  • 84.25
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
83.81
  • 83.81
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.31e3
  • 3.31e3
83.56
  • 83.56
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.59e3
  • 3.59e3
82.18
  • 82.18
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.28e3
  • 4.28e3
  • 5.57e3
78.74
  • 78.74
  • 72.37
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.53e3
  • 4.53e3
77.53
  • 77.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species18 genesCompare expression
Tetrapoda17 species19 genesCompare expression
Bilateria24 species26 genesCompare expression

Orthology information comes from OMA : ENSACAG00000004057.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000004057.

Cross-references

EnsemblENSACAG00000004057 (HDAC1)
HGNCHGNC:4852 (HDAC1)
Uniprot/SPTREMBLH9G8L6, H9G8L6_ANOCA

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