A. carolinensis Gene: SHANK2 - ENSACAG00000004060 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004060
NameSHANK2
DescriptionSH3 and multiple ankyrin repeat domains 2 [Source:HGNC Symbol;Acc:HGNC:14295]
OrganismAnolis carolinensis (green anole)
Synonym(s)cortbp1, cttnbp1, prosap1, shank, spank-3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.02e3
  • 2.02e3
89.98
  • 89.98
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.03e3
  • 5.03e3
  • 1.05e4
75.03
  • 75.03
  • 47.68
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
66.91
  • 66.91
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.26e3
  • 7.26e3
63.98
  • 63.98
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.13e3
  • 8.13e3
59.63
  • 59.63
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
8.22e3
  • 8.22e3
59.20
  • 59.20
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.98e3
  • 8.98e3
55.43
  • 55.43
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.56e3
  • 9.56e3
52.52
  • 52.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
48.68
  • 48.68
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
42.99
  • 42.99
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
41.39
  • 41.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
37.29
  • 37.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000004060 (SHANK2)
HGNCHGNC:14295 (SHANK2)
Uniprot/SPTREMBLH9G8F9, H9G8F9_ANOCA

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