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A. carolinensis Gene: CCDC60 - ENSACAG00000004090 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004090
NameCCDC60
Descriptioncoiled-coil domain containing 60 [Source:HGNC Symbol;Acc:HGNC:28610]
OrganismAnolis carolinensis (green anole)
Synonym(s)mgc39827
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.77e3
  • 7.77e3
61.43
  • 61.43
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.98e3
  • 7.98e3
60.40
  • 60.40
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
8.49e3
  • 8.49e3
  • 1.70e4
57.84
  • 57.84
  • 15.71
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.61e3
  • 8.61e3
  • 1.14e4
57.28
  • 57.28
  • 43.50
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.41e3
  • 9.41e3
  • 1.59e4
53.28
  • 53.28
  • 21.26
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
46.74
  • 46.74
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
46.10
  • 46.10
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
43.80
  • 43.80
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
40.31
  • 40.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.38e4
38.24
  • 38.24
  • 31.49
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
37.83
  • 37.83
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
28.43
  • 28.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000004090.

Cross-references

EnsemblENSACAG00000004090 (CCDC60)
HGNCHGNC:28610 (CCDC60)
Uniprot/SPTREMBLH9G8H4, H9G8H4_ANOCA

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