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A. carolinensis Gene: ITGA1 - ENSACAG00000004092 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004092
NameITGA1
Descriptionintegrin subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:6134]
OrganismAnolis carolinensis (green anole)
Synonym(s)cd49a, vla1
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.23e3
  • 3.23e3
83.98
  • 83.98
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.36e3
  • 4.36e3
78.38
  • 78.38
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.32e3
  • 5.32e3
73.59
  • 73.59
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
  • 1.15e4
72.67
  • 72.67
  • 42.67
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.13e3
  • 6.13e3
69.57
  • 69.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.17e3
  • 7.17e3
64.40
  • 64.40
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.55e3
  • 7.55e3
62.53
  • 62.53
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
8.24e3
  • 8.24e3
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
41.27
  • 41.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
39.96
  • 39.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
38.64
  • 38.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.27e4
38.38
  • 38.38
  • 36.79
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
30.73
  • 30.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000004092.

Cross-references

EnsemblENSACAG00000004092 (ITGA1)
HGNCHGNC:6134 (ITGA1)
Uniprot/SPTREMBLG1KCR0, G1KCR0_ANOCA

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