Gene: GCH1 - ENSACAG00000004252 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000004252
Name	GCH1
Description	GTP cyclohydrolase 1 [Source:HGNC Symbol;Acc:HGNC:4193]
Organism	Anolis carolinensis (green anole)
Synonym(s)	dyt14, dyt5, dyt5a, gch, gtpch1
Orthologs(s)	2 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	8.25e3 8.25e3	59.06 59.06	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	8.82e3 8.82e3	56.22 56.22	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	9.56e3 9.56e3 1.63e4	52.54 52.54 18.90	AEIR AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	9.63e3 9.63e3	52.21 52.21	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	1.09e4 1.09e4	45.78 45.78	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	1.12e4 1.12e4	44.37 44.37	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000104life cycle	1.19e4 1.19e4	41.09 41.09	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	1.24e4 1.24e4	38.54 38.54	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	1.28e4 1.28e4	36.45 36.45	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.36e4 1.36e4 1.40e4	32.24 32.24 30.54	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Tetrapoda	1 species Xenopus tropicalis (western clawed frog)	1 gene ENSXETG00000022741	Compare expression	[+]
Euteleostomi	2 species Danio rerio (zebrafish) Xenopus tropicalis (western clawed frog)	2 genes ENSDARG00000070453 gch1 ENSXETG00000022741	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000004252.

Cross-references

Ensembl	ENSACAG00000004252 (GCH1)
HGNC	HGNC:4193 (GCH1)
Uniprot/SPTREMBL	G1KCN3, G1KCN3_ANOCA