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A. carolinensis Gene: RAPH1 - ENSACAG00000004500 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004500
NameRAPH1
DescriptionRas association (RalGDS/AF-6) and pleckstrin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:14436]
OrganismAnolis carolinensis (green anole)
Synonym(s)als2cr18, als2cr9, kiaa1681
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
  • 1.12e4
73.45
  • 73.45
  • 44.27
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.98e3
  • 5.98e3
70.31
  • 70.31
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.03e3
  • 6.03e3
70.06
  • 70.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.06e3
  • 6.06e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.09e3
  • 6.09e3
69.77
  • 69.77
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.46e3
  • 6.46e3
67.95
  • 67.95
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.24e3
  • 7.24e3
64.06
  • 64.06
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.08e3
  • 8.08e3
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.88e3
  • 9.88e3
  • 1.13e4
50.97
  • 50.97
  • 43.89
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.08e4
49.12
  • 49.12
  • 46.15
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.21e4
47.35
  • 47.35
  • 39.87
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
42.67
  • 42.67
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
39.95
  • 39.95
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
37.60
  • 37.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
33.07
  • 33.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSACAG00000004500.

Cross-references

EnsemblENSACAG00000004500 (RAPH1)
HGNCHGNC:14436 (RAPH1)
Uniprot/SPTREMBLH9G959, H9G959_ANOCA

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