Gene: LRIF1 - ENSACAG00000004629 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000004629
Name	LRIF1
Description	ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:HGNC:30299]
Organism	Anolis carolinensis (green anole)
Synonym(s)	c1orf103, flj11269, rif1
Orthologs(s)	16 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	1.22e3 1.22e3	93.97 93.97	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	1.42e3 1.42e3	92.94 92.94	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.74e3 1.74e3	91.37 91.37	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	2.35e3 2.35e3	88.32 88.32	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	2.73e3 2.73e3	86.44 86.44	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	2.81e3 2.81e3	86.05 86.05	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	3.44e3 3.44e3	82.92 82.92	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	4.15e3 4.15e3	79.40 79.40	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	4.60e3 4.60e3	77.17 77.17	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	4.90e3 4.90e3 5.34e3	75.70 75.70 73.52	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	5.21e3 5.21e3 5.58e3	74.13 74.13 72.29	AEIR AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	5.53e3 5.53e3 7.42e3	72.54 72.54 63.18	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.04e3 6.04e3	70.00 70.00	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.96e3 7.96e3	60.49 60.49	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000000106 LRIF1	Compare expression	[+]
Amniota	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	16 genes ENSG00000121931 LRIF1 ENSMUSG00000056260 Lrif1 ENSPTRG00000001086 LRIF1 ENSGGOG00000007251 LRIF1 ENSMMUG00000000812 LRIF1 ENSRNOG00000017784 Lrif1 ENSBTAG00000012659 LRIF1 ENSSSCG00000006799 LRIF1 ENSOCUG00000002577 LRIF1 ENSCAFG00000019770 LRIF1 ENSFCAG00000027452 LRIF1 ENSCPOG00000014851 LRIF1 ENSEEUG00000003244 LRIF1 ENSMODG00000001565 LRIF1 ENSOANG00000014268 LRIF1 ENSGALG00000000106 LRIF1	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000004629.

Cross-references

Ensembl	ENSACAG00000004629 (LRIF1)
HGNC	HGNC:30299 (LRIF1)
Uniprot/SPTREMBL	G1KCZ4, G1KCZ4_ANOCA