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A. carolinensis Gene: LMCD1 - ENSACAG00000004723 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004723
NameLMCD1
DescriptionLIM and cysteine-rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
OrganismAnolis carolinensis (green anole)
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.91e3
  • 1.91e3
90.50
  • 90.50
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.38e3
  • 2.38e3
  • 3.53e3
88.21
  • 88.21
  • 82.50
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.21e3
  • 3.21e3
84.08
  • 84.08
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.08e3
  • 7.08e3
64.84
  • 64.84
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.87e3
  • 7.87e3
60.92
  • 60.92
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
8.95e3
  • 8.95e3
55.56
  • 55.56
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
46.10
  • 46.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.19e4
42.58
  • 42.58
  • 41.15
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
42.42
  • 42.42
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
36.70
  • 36.70
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
34.43
  • 34.43
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
  • 1.55e4
27.17
  • 27.17
  • 23.08
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000004723.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000004723.

Cross-references

EnsemblENSACAG00000004723 (LMCD1)
HGNCHGNC:6633 (LMCD1)
Uniprot/SPTREMBLH9G9F8, H9G9F8_ANOCA

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