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A. carolinensis Gene: SCN3B - ENSACAG00000004778 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004778
NameSCN3B
Descriptionsodium channel, voltage gated, type III beta subunit [Source:HGNC Symbol;Acc:HGNC:20665]
OrganismAnolis carolinensis (green anole)
Synonym(s)hsa243396
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
  • 1.22e4
70.84
  • 70.84
  • 39.64
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.54e3
  • 6.54e3
67.51
  • 67.51
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.44e3
  • 8.44e3
58.09
  • 58.09
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.13e3
  • 9.13e3
54.70
  • 54.70
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
29.95
  • 29.95
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
28.64
  • 28.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000004778.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000004778.

Cross-references

EnsemblENSACAG00000004778 (SCN3B)
HGNCHGNC:20665 (SCN3B)
Uniprot/SPTREMBLH9G9H8, H9G9H8_ANOCA

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