A. carolinensis Gene: COL6A2 - ENSACAG00000004843 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000004843
NameCOL6A2
Descriptioncollagen, type VI, alpha 2 [Source:HGNC Symbol;Acc:HGNC:2212]
OrganismAnolis carolinensis (green anole)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.19e3
  • 2.19e3
  • 6.36e3
89.16
  • 89.16
  • 68.45
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
87.81
  • 87.81
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
2.69e3
  • 2.69e3
86.66
  • 86.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.39e3
  • 3.39e3
  • 5.00e3
83.16
  • 83.16
  • 75.16
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.74e3
  • 3.74e3
81.41
  • 81.41
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.85e3
  • 3.85e3
80.91
  • 80.91
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.07e3
  • 5.07e3
74.85
  • 74.85
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.87e3
  • 6.87e3
65.89
  • 65.89
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.00e3
  • 8.00e3
  • 1.25e4
60.30
  • 60.30
  • 38.04
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.70e3
  • 8.70e3
56.82
  • 56.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.89e3
  • 8.89e3
55.86
  • 55.86
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
9.05e3
  • 9.05e3
55.06
  • 55.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
46.46
  • 46.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000004843 (COL6A2)
HGNCHGNC:2212 (COL6A2)
Uniprot/SPTREMBLG1KD78, G1KD78_ANOCA

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