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A. carolinensis Gene: TCEA3 - ENSACAG00000005034 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000005034
NameTCEA3
Descriptiontranscription elongation factor A (SII), 3 [Source:HGNC Symbol;Acc:HGNC:11615]
OrganismAnolis carolinensis (green anole)
Synonym(s)tfiis.h
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
622
  • 622
  • 867
96.92
  • 96.92
  • 95.70
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
94.45
  • 94.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.77e3
  • 1.77e3
91.24
  • 91.24
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
89.83
  • 89.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.27e3
  • 4.27e3
  • 4.69e3
78.78
  • 78.78
  • 76.71
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.78e3
  • 4.78e3
76.29
  • 76.29
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.51e3
  • 5.51e3
72.63
  • 72.63
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
5.85e3
  • 5.85e3
  • 1.56e4
70.95
  • 70.95
  • 22.50
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.25e3
  • 6.25e3
68.95
  • 68.95
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.41e3
  • 6.41e3
68.19
  • 68.19
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.05e3
  • 7.05e3
65.00
  • 65.00
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.69e3
  • 7.69e3
61.80
  • 61.80
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.29e3
  • 9.29e3
53.86
  • 53.86
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.26e4
42.53
  • 42.53
  • 37.25
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000005034.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000005034.

Cross-references

EnsemblENSACAG00000005034 (TCEA3)
HGNCHGNC:11615 (TCEA3)
Uniprot/SPTREMBLH9G9U8, H9G9U8_ANOCA

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