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A. carolinensis Gene: KDM5B - ENSACAG00000005107 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000005107
NameKDM5B
Descriptionlysine (K)-specific demethylase 5B [Source:HGNC Symbol;Acc:HGNC:18039]
OrganismAnolis carolinensis (green anole)
Synonym(s)ct31, jarid1b, plu-1, ppp1r98, rbbp2h1a
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
747
  • 747
96.30
  • 96.30
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.03e3
  • 1.03e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.08e3
  • 2.08e3
89.67
  • 89.67
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.56e3
  • 2.56e3
87.27
  • 87.27
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.11e3
  • 3.11e3
84.59
  • 84.59
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.33e3
  • 3.33e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.24e3
  • 4.24e3
78.97
  • 78.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.37e3
  • 5.37e3
  • 6.39e3
73.36
  • 73.36
  • 68.27
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.39e3
  • 7.39e3
  • 7.68e3
63.31
  • 63.31
  • 61.87
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.42e3
  • 7.42e3
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.04e3
  • 9.04e3
55.11
  • 55.11
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.43e3
  • 9.43e3
  • 1.09e4
53.19
  • 53.19
  • 45.96
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.57e3
  • 9.57e3
52.48
  • 52.48
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
50.27
  • 50.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000005107.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Metazoa2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000005107.

Cross-references

EnsemblENSACAG00000005107 (KDM5B)
HGNCHGNC:18039 (KDM5B)
Uniprot/SPTREMBLG1KDT6, G1KDT6_ANOCA

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