A. carolinensis Gene: TMA16 - ENSACAG00000005138 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000005138
NameTMA16
Descriptiontranslation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
OrganismAnolis carolinensis (green anole)
Synonym(s)c4orf43, flj11184
Orthologs(s)28 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
749
  • 749
  • 1.60e3
96.29
  • 96.29
  • 92.04
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.12e3
  • 1.12e3
94.44
  • 94.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.20e3
  • 1.20e3
94.06
  • 94.06
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.22e3
  • 1.22e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.28e3
  • 1.28e3
  • 2.98e3
93.65
  • 93.65
  • 85.20
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.84e3
  • 1.84e3
90.85
  • 90.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.93e3
  • 1.93e3
90.43
  • 90.43
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.35e3
  • 2.35e3
88.32
  • 88.32
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.56e3
  • 2.56e3
87.32
  • 87.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.28e3
  • 3.28e3
83.74
  • 83.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.51e3
  • 3.51e3
  • 3.54e3
82.58
  • 82.58
  • 82.43
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.77e3
  • 3.77e3
81.28
  • 81.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.36e3
  • 4.36e3
78.34
  • 78.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.57e3
  • 4.57e3
  • 6.61e3
77.32
  • 77.32
  • 67.19
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.96e3
  • 4.96e3
75.36
  • 75.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species20 genesCompare expression
Tetrapoda18 species21 genesCompare expression
Euteleostomi19 species22 genesCompare expression
Bilateria25 species28 genesCompare expression

Orthology information comes from OMA : ENSACAG00000005138.

Cross-references

EnsemblENSACAG00000005138 (TMA16)
HGNCHGNC:25638 (TMA16)
Uniprot/SPTREMBLG1KDM4, G1KDM4_ANOCA

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