A. carolinensis Gene: LIMS2 - ENSACAG00000005359 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000005359
NameLIMS2
DescriptionLIM and senescent cell antigen-like domains 2 [Source:HGNC Symbol;Acc:HGNC:16084]
OrganismAnolis carolinensis (green anole)
Synonym(s)pinch-2, pinch2
Orthologs(s)24 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.96e3
  • 1.96e3
  • 4.19e3
90.29
  • 90.29
  • 79.19
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.75e3
  • 3.75e3
  • 6.45e3
81.40
  • 81.40
  • 68.00
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.79e3
  • 3.79e3
81.19
  • 81.19
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.06e3
  • 6.06e3
69.89
  • 69.89
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.90e3
  • 7.90e3
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.93e3
  • 7.93e3
  • 8.27e3
60.64
  • 60.64
  • 58.97
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
8.23e3
  • 8.23e3
59.16
  • 59.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.32e3
  • 8.32e3
58.67
  • 58.67
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.60e3
  • 8.60e3
57.32
  • 57.32
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.52e3
  • 9.52e3
52.74
  • 52.74
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
43.04
  • 43.04
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.17e4
42.12
  • 42.12
  • 41.84
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
38.61
  • 38.61
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
31.36
  • 31.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSACAG00000005359.

Paralogs (same species)

Paralogy information comes from OMA : ENSACAG00000005359.

Cross-references

EnsemblENSACAG00000005359 (LIMS2)
HGNCHGNC:16084 (LIMS2)
Uniprot/SPTREMBLG1KE18, G1KE18_ANOCA

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