Gene: RAB5B - ENSACAG00000005380 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000005380
Name	RAB5B
Description	RAB5B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9784]
Organism	Anolis carolinensis (green anole)
Orthologs(s)	22 orthologs
Paralog(s)	61 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	724 724	96.41 96.41	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	747 747	96.30 96.30	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	751 751	96.28 96.28	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	790 790	96.08 96.08	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.34e3 1.34e3	93.34 93.34	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.37e3 1.37e3 1.82e3	93.19 93.19 90.99	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.55e3 1.55e3 4.01e3	92.31 92.31 80.08	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	1.91e3 1.91e3	90.52 90.52	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	2.02e3 2.02e3	90.00 90.00	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	2.38e3 2.38e3	88.20 88.20	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.98e3 2.98e3	85.21 85.21	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	3.03e3 3.03e3	84.98 84.98	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	3.11e3 3.11e3 3.14e3	84.56 84.56 84.43	AEIR AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	3.19e3 3.19e3	84.17 84.17	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000027222 RAB5B	Compare expression	[+]
Amniota	14 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Gallus gallus (chicken)	14 genes ENSG00000111540 RAB5B ENSMUSG00000000711 Rab5b ENSPTRG00000005071 RAB5B ENSGGOG00000008325 RAB5B ENSMMUG00000031853 RAB5B ENSRNOG00000006130 Rab5b ENSBTAG00000014129 RAB5B ENSECAG00000023306 RAB5B ENSOCUG00000013895 RAB5B ENSCAFG00000000087 RAB5B ENSFCAG00000013974 RAB5B ENSCPOG00000019417 RAB5B ENSEEUG00000006745 RAB5B ENSGALG00000027222 RAB5B	Compare expression	[+]
Tetrapoda	15 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	15 genes ENSG00000111540 RAB5B ENSMUSG00000000711 Rab5b ENSPTRG00000005071 RAB5B ENSGGOG00000008325 RAB5B ENSMMUG00000031853 RAB5B ENSRNOG00000006130 Rab5b ENSBTAG00000014129 RAB5B ENSECAG00000023306 RAB5B ENSOCUG00000013895 RAB5B ENSCAFG00000000087 RAB5B ENSFCAG00000013974 RAB5B ENSCPOG00000019417 RAB5B ENSEEUG00000006745 RAB5B ENSGALG00000027222 RAB5B ENSXETG00000006194 rab5b	Compare expression	[+]
Bilateria	22 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	22 genes ENSG00000111540 RAB5B ENSMUSG00000000711 Rab5b FBgn0014010 Rab5 WBGene00004268 rab-5 ENSPTRG00000005071 RAB5B ENSGGOG00000008325 RAB5B ENSMMUG00000031853 RAB5B ENSRNOG00000006130 Rab5b ENSBTAG00000014129 RAB5B ENSECAG00000023306 RAB5B ENSOCUG00000013895 RAB5B ENSCAFG00000000087 RAB5B ENSFCAG00000013974 RAB5B ENSCPOG00000019417 RAB5B ENSEEUG00000006745 RAB5B ENSGALG00000027222 RAB5B ENSXETG00000006194 rab5b FBgn0092305 GF15280 FBgn0139932 GI17188 FBgn0194235 GD22841 FBgn0209339 GJ22226 FBgn0232713 GE15124	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000005380.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Opisthokonta	2 genes ENSACAG00000000017 RAB5A ENSACAG00000017960 RAB5C	Compare expression	[+]
Eukaryota	61 genes ENSACAG00000000017 RAB5A ENSACAG00000000744 RAB4A ENSACAG00000000875 RAB1A ENSACAG00000000954 RAP2A ENSACAG00000001098 RAB30 ENSACAG00000001712 RAB9A ENSACAG00000001866 ENSACAG00000002265 RHEB ENSACAG00000003034 RAB2B ENSACAG00000003090 NRAS ENSACAG00000003643 RAB35 ENSACAG00000003707 RAB31 ENSACAG00000003841 MRAS ENSACAG00000004069 RALB ENSACAG00000004164 RHOQ ENSACAG00000004479 RAB11A ENSACAG00000004554 RAB17 ENSACAG00000005247 ENSACAG00000005694 RAB2A ENSACAG00000005993 RAB7A ENSACAG00000006243 RAB39A ENSACAG00000006656 RAB23 ENSACAG00000006873 RAB27A ENSACAG00000008285 RAB14 ENSACAG00000008297 RHOA ENSACAG00000008824 RAB27B ENSACAG00000009125 ENSACAG00000010192 RAC3 ENSACAG00000010402 ENSACAG00000010665 RHOB ENSACAG00000011260 RAP2B ENSACAG00000011782 RHOH ENSACAG00000012345 ENSACAG00000012369 RRAS2 ENSACAG00000012440 RAB29 ENSACAG00000012480 ENSACAG00000012784 RAB7B ENSACAG00000012949 RAC1 ENSACAG00000013126 RAB43 ENSACAG00000013638 ENSACAG00000013676 RAB10 ENSACAG00000013955 RRAS ENSACAG00000014056 RHOG ENSACAG00000014082 RIT2 ENSACAG00000014318 RAB9B ENSACAG00000014624 RAB22A ENSACAG00000014756 RAB8A ENSACAG00000014920 HRAS ENSACAG00000014965 ENSACAG00000015505 RHEBL1 ENSACAG00000016042 RAC2 ENSACAG00000016146 RHOJ ENSACAG00000016262 IFT27 ENSACAG00000016658 RAB44 ENSACAG00000016810 ENSACAG00000016948 KRAS ENSACAG00000017404 ENSACAG00000017605 RALA ENSACAG00000017941 RHOC ENSACAG00000017960 RAB5C ENSACAG00000021104 RIT1	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000005380.

Cross-references

Ensembl	ENSACAG00000005380 (RAB5B)
HGNC	HGNC:9784 (RAB5B)
Uniprot/SPTREMBL	H9GA56, H9GA56_ANOCA