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Gene: HMGB2 - ENSACAG00000005480
- Anolis carolinensis (green anole)
General information
| Ensembl ID | ENSACAG00000005480 |
|---|---|
| Name | HMGB2 |
| Description | high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000] |
| Organism | Anolis carolinensis (green anole) |
| Synonym(s) | hmg2 |
| Orthologs(s) | 25 orthologs |
| Paralog(s) | 2 paralogs |
Expression
| Anat. entity ID | Anatomical entity | Developmental stage(s) | Rank score | Expression score | Sources |
|---|---|---|---|---|---|
| UBERON:0000992 | female gonad |
| 30.0
| 99.86
| AEIR
|
| UBERON:1000003 | dewlap |
| 43.0
| 99.79
| AEIR
|
| UBERON:0005418 | hindlimb bud |
| 43.0
| 99.79
| AEIR
|
| UBERON:0007144 | embryonic post-anal tail |
| 47.5
| 99.77
| AEIR
|
| UBERON:0008812 | hemipenis |
| 48.0
| 99.77
| AEIR
|
| UBERON:0005417 | forelimb bud |
| 58.5
| 99.71
| AEIR
|
| UBERON:0002369 | adrenal gland |
| 191
| 99.06
| AEIR
|
| UBERON:0000473 | testis |
| 194
| 99.04
| AEIR
|
| UBERON:0002048 | lung |
| 197
| 99.03
| AEIR
|
| UBERON:0000948 | heart |
| 216
| 98.93
| AEIR
|
| UBERON:0000955 | brain |
| 235
| 98.84
| AEIR
|
| UBERON:0001134 | skeletal muscle tissue |
| 252
| 98.75
| AEIR
|
| UBERON:0002107 | liver |
| 270
| 98.66
| AEIR
|
| UBERON:0002113 | kidney |
| 321
| 98.41
| AEIR
|
| A | Affymetrix |
|---|---|
| E | EST |
| I | In Situ |
| R | RNA-Seq |
| data |
| no data |
| 3.25e4 | lightgrey: low confidence scores |
|---|---|
| important score variation |
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.
Orthologs
Orthology information comes from OMA : ENSACAG00000005480.
Paralogs (same species)
| Taxon name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Vertebrata | 1 gene
| Compare expression | |
| Chordata | 2 genes
| Compare expression |
Paralogy information comes from OMA : ENSACAG00000005480.
Cross-references
| Ensembl | ENSACAG00000005480 (HMGB2) |
|---|---|
| HGNC | HGNC:5000 (HMGB2) |
| Uniprot/SPTREMBL | G1KE50, G1KE50_ANOCA, R4G9G8, R4G9G8_ANOCA |