A. carolinensis Gene: HMGB2 - ENSACAG00000005480 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000005480
NameHMGB2
Descriptionhigh mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]
OrganismAnolis carolinensis (green anole)
Synonym(s)hmg2
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
30.0
  • 30.0
99.86
  • 99.86
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
43.0
  • 43.0
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
43.0
  • 43.0
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
47.5
  • 47.5
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
48.0
  • 48.0
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
58.5
  • 58.5
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
191
  • 191
99.06
  • 99.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
194
  • 194
99.04
  • 99.04
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
197
  • 197
99.03
  • 99.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
216
  • 216
  • 237
98.93
  • 98.93
  • 98.83
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
235
  • 235
  • 299
98.84
  • 98.84
  • 98.52
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
252
  • 252
  • 389
98.75
  • 98.75
  • 98.07
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
270
  • 270
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
321
  • 321
98.41
  • 98.41
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species23 genesCompare expression
Tetrapoda17 species24 genesCompare expression
Bilateria18 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000005480.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000005480.

Cross-references

EnsemblENSACAG00000005480 (HMGB2)
HGNCHGNC:5000 (HMGB2)
Uniprot/SPTREMBLG1KE50, G1KE50_ANOCA, R4G9G8, R4G9G8_ANOCA

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