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A. carolinensis Gene: SSX2IP - ENSACAG00000005540 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000005540
NameSSX2IP
Descriptionsynovial sarcoma, X breakpoint 2 interacting protein [Source:HGNC Symbol;Acc:HGNC:16509]
OrganismAnolis carolinensis (green anole)
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
86.82
  • 86.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.06e3
  • 3.06e3
84.81
  • 84.81
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.49e3
  • 3.49e3
82.67
  • 82.67
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.72e3
  • 3.72e3
  • 5.67e3
81.55
  • 81.55
  • 71.87
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.78e3
  • 4.78e3
  • 9.63e3
76.29
  • 76.29
  • 52.17
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.09e3
  • 5.09e3
  • 6.62e3
74.71
  • 74.71
  • 67.12
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.37e3
  • 5.37e3
73.33
  • 73.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.59e3
  • 5.59e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.01e3
  • 6.01e3
70.16
  • 70.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.28e3
  • 6.28e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.54e3
  • 7.54e3
62.55
  • 62.55
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.80e3
  • 7.80e3
61.28
  • 61.28
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.06e3
  • 8.06e3
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.15e4
47.83
  • 47.83
  • 42.71
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
41.01
  • 41.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSACAG00000005540.

Cross-references

EnsemblENSACAG00000005540 (SSX2IP)
HGNCHGNC:16509 (SSX2IP)
Uniprot/SPTREMBLH9GAD7, H9GAD7_ANOCA

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