A. carolinensis Gene: SCN1B - ENSACAG00000005745 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000005745
NameSCN1B
Descriptionsodium channel, voltage gated, type I beta subunit [Source:HGNC Symbol;Acc:HGNC:10586]
OrganismAnolis carolinensis (green anole)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
283
  • 283
  • 390
98.60
  • 98.60
  • 98.07
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
541
  • 541
  • 2.01e3
97.32
  • 97.32
  • 90.04
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
964
  • 964
95.22
  • 95.22
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.86e3
  • 8.86e3
56.00
  • 56.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.15e3
  • 9.15e3
  • 1.44e4
54.57
  • 54.57
  • 28.34
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
48.10
  • 48.10
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
44.38
  • 44.38
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
43.60
  • 43.60
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
40.04
  • 40.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
34.80
  • 34.80
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.42e4
  • 1.42e4
29.68
  • 29.68
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
28.71
  • 28.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000005745 (SCN1B)
HGNCHGNC:10586 (SCN1B)
Uniprot/SPTREMBLH9GAJ2, H9GAJ2_ANOCA

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