A. carolinensis Gene: VPS54 - ENSACAG00000006033 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000006033
NameVPS54
DescriptionVPS54 GARP complex subunit [Source:HGNC Symbol;Acc:HGNC:18652]
OrganismAnolis carolinensis (green anole)
Synonym(s)hcc8, ppp1r164

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.45e3
  • 2.45e3
87.82
  • 87.82
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.74e3
  • 2.74e3
86.40
  • 86.40
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
3.15e3
  • 3.15e3
84.35
  • 84.35
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.40e3
  • 3.40e3
83.12
  • 83.12
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.59e3
  • 3.59e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.39e3
  • 4.39e3
78.22
  • 78.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.44e3
  • 4.44e3
77.94
  • 77.94
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.67e3
  • 4.67e3
76.82
  • 76.82
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
4.71e3
  • 4.71e3
76.63
  • 76.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.97e3
  • 4.97e3
  • 6.37e3
75.31
  • 75.31
  • 68.36
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.15e3
  • 5.15e3
74.46
  • 74.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.27e3
  • 6.27e3
68.88
  • 68.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.64e3
  • 6.64e3
  • 7.33e3
67.02
  • 67.02
  • 63.61
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.00e3
  • 7.00e3
  • 8.15e3
65.27
  • 65.27
  • 59.54
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000006033 (VPS54)
HGNCHGNC:18652 (VPS54)
Uniprot/SPTREMBLG1KF33, G1KF33_ANOCA

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