Gene: CPNE1 - ENSACAG00000006217 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000006217
Name	CPNE1
Description	copine I [Source:HGNC Symbol;Acc:HGNC:2314]
Organism	Anolis carolinensis (green anole)
Synonym(s)	cpn1
Orthologs(s)	16 orthologs
Paralog(s)	8 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	997 997	95.06 95.06	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	1.05e3 1.05e3	94.78 94.78	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	1.19e3 1.19e3	94.11 94.11	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.22e3 1.22e3	93.97 93.97	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.29e3 1.29e3 3.12e3	93.58 93.58 84.49	AEIR AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	1.37e3 1.37e3	93.19 93.19	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	1.72e3 1.72e3	91.46 91.46	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.46e3 2.46e3	87.80 87.80	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	2.80e3 2.80e3	86.08 86.08	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	3.01e3 3.01e3 6.48e3	85.07 85.07 67.83	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.33e3 3.33e3	83.48 83.48	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	4.39e3 4.39e3 5.85e3	78.19 78.19 70.94	AEIR AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	5.38e3 5.38e3	73.29 73.29	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	7.71e3 7.71e3	61.70 61.70	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000001627 CPNE1	Compare expression	[+]
Amniota	13 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Gallus gallus (chicken)	14 genes ENSG00000214078 CPNE1 ENSMUSG00000074643 Cpne1 ENSPTRG00000013446 RBM12 ENSPTRG00000040708 CPNE1 ENSGGOG00000028500 CPNE1 ENSMMUG00000020960 CPNE1 ENSRNOG00000046990 LOC100910990 ENSBTAG00000006955 CPNE1 ENSSSCG00000007306 CPNE1 ENSECAG00000001899 CPNE1 ENSOCUG00000023994 CPNE1 ENSCAFG00000031721 CPNE1 ENSFCAG00000018189 CPNE1 ENSGALG00000001627 CPNE1	Compare expression	[+]
Tetrapoda	14 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	15 genes ENSG00000214078 CPNE1 ENSMUSG00000074643 Cpne1 ENSPTRG00000013446 RBM12 ENSPTRG00000040708 CPNE1 ENSGGOG00000028500 CPNE1 ENSMMUG00000020960 CPNE1 ENSRNOG00000046990 LOC100910990 ENSBTAG00000006955 CPNE1 ENSSSCG00000007306 CPNE1 ENSECAG00000001899 CPNE1 ENSOCUG00000023994 CPNE1 ENSCAFG00000031721 CPNE1 ENSFCAG00000018189 CPNE1 ENSGALG00000001627 CPNE1 ENSXETG00000007428 cpne1	Compare expression	[+]
Euteleostomi	15 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000214078 CPNE1 ENSMUSG00000074643 Cpne1 ENSDARG00000075536 cpne1 ENSPTRG00000013446 RBM12 ENSPTRG00000040708 CPNE1 ENSGGOG00000028500 CPNE1 ENSMMUG00000020960 CPNE1 ENSRNOG00000046990 LOC100910990 ENSBTAG00000006955 CPNE1 ENSSSCG00000007306 CPNE1 ENSECAG00000001899 CPNE1 ENSOCUG00000023994 CPNE1 ENSCAFG00000031721 CPNE1 ENSFCAG00000018189 CPNE1 ENSGALG00000001627 CPNE1 ENSXETG00000007428 cpne1	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000006217.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	1 gene ENSACAG00000009847 CPNE3	Compare expression	[+]
Bilateria	2 genes ENSACAG00000006396 CPNE2 ENSACAG00000009847 CPNE3	Compare expression	[+]
Eumetazoa	5 genes ENSACAG00000006396 CPNE2 ENSACAG00000007800 CPNE8 ENSACAG00000009847 CPNE3 ENSACAG00000010141 CPNE9 ENSACAG00000010611 CPNE5	Compare expression	[+]
Eukaryota	8 genes ENSACAG00000001407 CPNE4 ENSACAG00000006396 CPNE2 ENSACAG00000007800 CPNE8 ENSACAG00000009847 CPNE3 ENSACAG00000010141 CPNE9 ENSACAG00000010611 CPNE5 ENSACAG00000017091 ENSACAG00000028103	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000006217.

Cross-references

Ensembl	ENSACAG00000006217 (CPNE1)
HGNC	HGNC:2314 (CPNE1)
Uniprot/SPTREMBL	G1KF90, G1KF90_ANOCA